Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,600,204 IS1 (–) +8 bp intergenic (‑15/+27) yjjA ← / ← dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)104 (1.120) 55/278 0.3 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4600204 = 0 (0.000)intergenic (‑15/+34) yjjA/dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC
* ? NC_000913 = 3584195NA (NA)95 (1.020) 55/278 0.3 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4600211 0 (0.000)intergenic (‑22/+27) yjjA/dnaC DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC

Only 100 of 104 total aligned reads displayed.

CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583566‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGC  >  NC_000913/4600204‑4600340
                                                                                                                                                                                                                                                                                    
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG                                                                                                                                          >  2:1225307/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        >  1:1343205/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        >  1:1521325/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        >  2:223171/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        <  2:1146240/140‑1
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        <  1:128372/140‑1
   ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAT                                                                                                                                       >  1:832634/1‑140
   ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAT                                                                                                                                       >  1:1418482/1‑140
    TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATT                                                                                                                                      <  1:1092685/140‑1
    TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        <  2:383114/138‑1
    TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAA                                                                                                                                        >  1:383114/1‑138
     GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTG                                                                                                                                     <  2:41965/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  1:1242447/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  2:57376/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  1:1327798/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  1:461210/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  1:1225307/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  1:1201881/140‑1
       CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTG                                                                                                                                   <  2:269415/140‑1
         GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTC                                                                                                                                 <  2:571811/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  2:555309/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  2:698856/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  1:1095259/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  1:1204179/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  2:916323/140‑1
          GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCG                                                                                                                                <  2:404929/140‑1
           CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGC                                                                                                                               <  1:389102/140‑1
           CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGC                                                                                                                               <  1:1373968/140‑1
           CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGC                                                                                                                               >  1:192346/1‑140
           CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGC                                                                                                                               <  1:934980/140‑1
                            CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAAC                                                                                                              <  2:470529/140‑1
                             GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACG                                                                                                             <  1:545572/140‑1
                             GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACG                                                                                                             <  2:489206/140‑1
                             GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACG                                                                                                             <  1:445276/140‑1
                               ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           <  1:235886/140‑1
                               ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           <  1:1431827/140‑1
                               ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           <  1:996774/140‑1
                               ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           <  2:80578/140‑1
                                 CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGA                                                                                                         >  2:718473/1‑140
                                     CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAA                                                                                                     <  2:1521325/140‑1
                                     CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAA                                                                                                     <  1:1436708/140‑1
                                      CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGTGGATTAAT                                                                                                    <  2:1260570/140‑1
                                      CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAAT                                                                                                    >  1:651805/1‑140
                                       GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATA                                                                                                   <  2:1560126/140‑1
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           >  1:369760/1‑128
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGG                                                                                                           <  2:369760/128‑1
                                                  AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTG                                                                                        >  1:151863/1‑140
                                                      GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTAC                                                                                    <  2:13224/140‑1
                                                      GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTAC                                                                                    <  2:651805/140‑1
                                                          GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGG                                                                                <  1:680948/140‑1
                                                           GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGC                                                                               <  2:1072487/140‑1
                                                            ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCT                                                                              >  2:427210/1‑140
                                                            ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCT                                                                              >  1:320686/1‑140
                                                            ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCT                                                                              >  1:616522/1‑140
                                                             CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTA                                                                             <  1:300644/140‑1
                                                                    TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGC                                                                      >  1:1145569/1‑140
                                                                        AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATC                                                                  <  2:859353/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCC                                                                 <  2:967925/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCC                                                                 <  1:941102/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCC                                                                 <  1:597188/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCC                                                                 <  1:1552321/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCC                                                                 <  2:832634/140‑1
                                                                         ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGAGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTTCCCGGCTACGGTAGCTATCC                                                                 <  2:196612/140‑1
                                                                           AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCA                                                               >  2:401908/1‑140
                                                                             AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGT                                                             >  1:381287/1‑140
                                                                                CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGA                                                          <  1:105766/140‑1
                                                                                    TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGAT                                                      >  1:1163767/1‑140
                                                                                           CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCAC                                               <  2:616522/140‑1
                                                                                           CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCAC                                               >  1:291810/1‑140
                                                                                            CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCATCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACA                                              <  1:223171/140‑1
                                                                                            CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACGCACA                                              <  1:1527156/140‑1
                                                                                            CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACA                                              <  2:192346/140‑1
                                                                                            CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACA                                              <  1:718473/140‑1
                                                                                              CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAA                                            >  2:1332248/1‑140
                                                                                              CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAA                                            >  2:902271/1‑140
                                                                                                      CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACC                                    <  1:1283917/140‑1
                                                                                                      CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACC                                    >  2:710484/1‑140
                                                                                                      CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACC                                    <  2:489887/140‑1
                                                                                                         TCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAG                                 >  1:824975/1‑140
                                                                                                           ATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGC                               <  2:1145569/140‑1
                                                                                                               ACTAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCAT                           >  2:1435959/1‑140
                                                                                                                 TAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCTCCCACAAACTGTTACCCAGGCGCATAC                         <  1:1558251/140‑1
                                                                                                                 TAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATAC                         >  1:296044/1‑140
                                                                                                                 TAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATAC                         <  1:401908/140‑1
                                                                                                                 TAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATAC                         >  1:490842/1‑140
                                                                                                                 TAAATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATAC                         >  2:1186845/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGG                       >  1:393836/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGG                       >  1:511050/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGG                       >  2:1105901/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGG                       >  1:1149780/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGG                       >  1:1045733/1‑140
                                                                                                                    ATCAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGT                      >  2:1539631/1‑140
                                                                                                                      CAGTAAGTTGGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCC                    >  1:959144/1‑140
                                                                                                                               GGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGT           >  2:1141189/1‑140
                                                                                                                               GGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGT           >  2:209330/1‑140
                                                                                                                               GGCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGT           >  2:858316/1‑140
                                                                                                                                GCAGCATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTT          <  1:902271/140‑1
                                                                                                                                    CATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCC      <  2:320686/140‑1
                                                                                                                                     ATCACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCC     <  2:1179427/140‑1
                                                                                                                                        ACCGAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGC  <  1:1539631/140‑1
                                                                                                                                                                                                                                                                                    
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583566‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATTGTGTCGCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGC  >  NC_000913/4600204‑4600340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.