BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,227,887	G→T	P29P (CCG→CCT)	ygjJ →	protein YgjJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,227,887	0	G	T	100.0%	618.9 / NA	175	P29P (CCG→CCT)	ygjJ	protein YgjJ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (85/90); total (85/90)

Only 100 of 177 total aligned reads displayed.

ATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCT  >  NC_000913/3227751‑3228023

                  tGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATgacg                                                                                                                             <  1:255098/132‑1 (MQ=255)

                   gTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATgacg                                                                                                                             >  2:965851/1‑131 (MQ=255)

                    tACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAac                                                                                                                   >  2:1320583/1‑140 (MQ=255)

                    tACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAac                                                                                                                   >  2:46574/1‑140 (MQ=255)

                     aCTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAaca                                                                                                                  <  2:1156048/140‑1 (MQ=255)

                      cTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAacac                                                                                                                 <  1:241679/140‑1 (MQ=255)

                      cTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAacac                                                                                                                 <  2:874312/140‑1 (MQ=255)

                       tttttCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACAcc                                                                                                                <  2:712194/140‑1 (MQ=255)

                         tttCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCg                                                                                                              <  2:1547996/140‑1 (MQ=255)

                             tttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAAt                                                                                                          <  2:393837/140‑1 (MQ=255)

                              ttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGTTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAAtt                                                                                                         <  1:658063/140‑1 (MQ=255)

                              ttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAAtt                                                                                                         >  1:1043150/1‑140 (MQ=255)

                              ttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAAtt                                                                                                         >  2:1226766/1‑140 (MQ=255)

                              ttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAAtt                                                                                                         >  2:817719/1‑140 (MQ=255)

                                 gCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTAcc                                                                                                      >  2:273772/1‑140 (MQ=255)

                                  cTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCt                                                                                                     >  1:788997/1‑140 (MQ=255)

                                      tGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGAc                                                                                                 >  2:1424790/1‑140 (MQ=255)

                                       ggATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACa                                                                                                <  2:255601/140‑1 (MQ=255)

                                            aaCACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACAtcttc                                                                                           >  2:433680/1‑140 (MQ=255)

                                             acacAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACAtcttct                                                                                          <  1:711114/140‑1 (MQ=255)

                                             acacAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACAtcttct                                                                                          >  2:1545993/1‑140 (MQ=255)

                                                  aTGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTc                                                                                     >  2:1288543/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTct                                                                                    >  2:75006/1‑139 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:1082635/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:178391/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:326315/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:108162/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:755628/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  2:944771/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:111033/1‑140 (MQ=255)

                                                   tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTCTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                    >  1:723457/1‑140 (MQ=255)

                                                           aTCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGttt                                                                            >  1:1167971/1‑140 (MQ=255)

                                                                tGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTTCCTCGACATCTTCTCCTTCATTTCGTTTTTACg                                                                       <  2:168386/140‑1 (MQ=255)

                                                                tGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACg                                                                       >  1:389256/1‑140 (MQ=255)

                                                                  cACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGc                                                                     >  2:1111907/1‑140 (MQ=255)

                                                                    ccATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGa                                                                   >  2:1057325/1‑140 (MQ=255)

                                                                     cATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGaa                                                                  <  2:902918/140‑1 (MQ=255)

                                                                      aTGCAGAGCATTACTTGCTCTGCCGTCTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAt                                                                 <  2:723457/140‑1 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCTGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  1:1216668/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACGCCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  1:1191474/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGTCGAAtt                                                                >  2:1130957/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  1:462896/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  1:1498760/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  2:381465/1‑140 (MQ=255)

                                                                       tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAtt                                                                >  1:91824/1‑140 (MQ=255)

                                                                          agagCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAgg                                                             >  2:365018/1‑140 (MQ=255)

                                                                            agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAgggg                                                           <  2:1218114/140‑1 (MQ=255)

                                                                            agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAgggg                                                           <  1:39322/140‑1 (MQ=255)

                                                                             gCATTACTTGCTCTACCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGt                                                          <  1:198006/140‑1 (MQ=255)

                                                                              cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGtt                                                         <  2:512907/140‑1 (MQ=255)

                                                                              cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGtt                                                         <  1:46574/140‑1 (MQ=255)

                                                                              cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTACGTTTTTACGGCGAATTAGGGGtt                                                         >  2:103135/1‑140 (MQ=255)

                                                                                ttACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtgg                                                       <  1:855951/140‑1 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggt                                                      >  2:304098/1‑140 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggt                                                      >  1:945746/1‑140 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggt                                                      <  2:1040290/140‑1 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggt                                                      >  1:135237/1‑140 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggt                                                      >  1:134590/1‑140 (MQ=255)

                                                                                 tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTACGTTTTTACGGCGAATTAGGGGTtggt                                                      <  1:103135/140‑1 (MQ=255)

                                                                                   cTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggtgg                                                    <  1:1545993/140‑1 (MQ=255)

                                                                                   cTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggtgg                                                    >  1:1305808/1‑140 (MQ=255)

                                                                                    ttGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGa                                                   <  2:639275/140‑1 (MQ=255)

                                                                                      gCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGGCACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGata                                                 >  1:569821/1‑140 (MQ=255)

                                                                                        tctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatata                                               >  2:666296/1‑140 (MQ=255)

                                                                                        tctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatata                                               >  2:97792/1‑140 (MQ=255)

                                                                                        tctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatata                                               <  2:1060624/140‑1 (MQ=255)

                                                                                          tGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATg                                             >  1:585880/1‑140 (MQ=255)

                                                                                           gCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATgg                                            >  2:697665/1‑140 (MQ=255)

                                                                                            ccGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGa                                           >  2:334579/1‑140 (MQ=255)

                                                                                              gTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGAtt                                         <  1:339639/140‑1 (MQ=255)

                                                                                                tttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTa                                       >  1:405593/1‑140 (MQ=255)

                                                                                                    cTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAgg                                   >  2:1125481/1‑140 (MQ=255)

                                                                                                      aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGt                                 <  2:108162/140‑1 (MQ=255)

                                                                                                         ccTTTTCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTaag                              >  1:1151419/1‑140 (MQ=255)

                                                                                                           ttttCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGaa                            <  2:1398334/140‑1 (MQ=255)

                                                                                                            tttCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAAt                           >  1:945576/1‑140 (MQ=255)

                                                                                                             ttCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATa                          <  1:304098/140‑1 (MQ=255)

                                                                                                             ttCTGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATa                          <  1:697665/140‑1 (MQ=255)

                                                                                                                tGCGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAAc                       <  1:1071952/140‑1 (MQ=255)

                                                                                                                  cGGCAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACAt                     <  1:53495/140‑1 (MQ=255)

                                                                                                                     cAGGAGAAGAAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATaaa                  <  2:1305808/140‑1 (MQ=255)

                                                                                                                         agaagaAGCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACa              <  1:1037277/140‑1 (MQ=255)

                                                                                                                            agaagCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCg           <  2:135237/140‑1 (MQ=255)

                                                                                                                             gaagCACGTCCTGCAGAACATGACGACACAAAAACGCCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGa          <  2:1191474/140‑1 (MQ=255)

                                                                                                                              aagCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc         <  2:405593/140‑1 (MQ=255)

                                                                                                                              aagCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc         <  2:134590/140‑1 (MQ=255)

                                                                                                                              aagCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc         <  1:1130957/140‑1 (MQ=255)

                                                                                                                               agCACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCAACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACg        <  2:259962/140‑1 (MQ=255)

                                                                                                                                 cACGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGt      <  1:837261/140‑1 (MQ=255)

                                                                                                                                  aCGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc         >  2:198946/1‑136 (MQ=255)

                                                                                                                                   cGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc    <  1:433680/140‑1 (MQ=255)

                                                                                                                                   cGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc    <  1:1373288/140‑1 (MQ=255)

                                                                                                                                   cGTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc    <  1:486954/140‑1 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   >  1:716874/1‑140 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   <  1:97792/140‑1 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   <  2:76659/140‑1 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   <  1:1440865/140‑1 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   <  2:855337/140‑1 (MQ=255)

                                                                                                                                    gTCCTGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc   <  1:669383/140‑1 (MQ=255)

                                                                                                                                     tCCTGCAGAACATGACGACACAAAAACACCCGCAATTCCCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCAAATTAGGGGTTGGGGGATATTTGGATTTGGAGGGTGAGAATAAACATAAATACACCGACGGAACCt  >  2:649843/1‑140 (MQ=255)

ATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCT  >  NC_000913/3227751‑3228023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`