New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3363001 = | 92 (1.300) | 102 (1.450) | 58/276 | 0.1 | 68.6% | coding (195/2382 nt) | yhcD | putative fimbrial usher protein YhcD |
? | NC_000913 | 3766087 = | 2 (0.030) | coding (3905/4134 nt) | rhsA | rhs element protein RhsA |
Only 100 of 195 total aligned reads displayed.
CCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGT > NC_000913/3362862‑3363140 | ttagttcctgaagtacgtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTaa < 1:842176‑M1/5‑1 (MQ=255) aTGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGc > 2:848514/1‑140 (MQ=255) cctgaagtacgtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCg < 1:261325‑M1/11‑1 (MQ=255) agtacgtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGaaaaa > 2:507584‑M1/125‑140 (MQ=255) cgtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCgaaaaaaaaa < 2:314003‑M1/20‑2 (MQ=255) cgtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑g < 2:1162033‑M1/20‑1 (MQ=255) gtcacatctgtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑gg > 2:1063951‑M1/120‑140 (MQ=255) aTTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑gg < 2:801240/140‑1 (MQ=255) ttGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGc > 2:272328/1‑140 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa < 2:356585/140‑1 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa < 1:542658/140‑1 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa > 2:542658/1‑140 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa > 1:631904/1‑140 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa > 1:858695/1‑140 (MQ=255) gCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCaa > 2:679873/1‑140 (MQ=255) gtcgggttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaaactatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGc < 2:727868‑M1/30‑1 (MQ=255) gttttttcccatcactccagaatctgtcatttattaagtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAAAGGCAACATTGCTAcg > 1:314003‑M1/106‑140 (MQ=255) ttttttcccatcactccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTAcgcg < 1:607646‑M1/36‑1 (MQ=255) tttGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTAcgcg < 1:576919/140‑1 (MQ=255) tccagaatctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATg < 1:522510‑M1/50‑1 (MQ=255) cagaatctgtcatttattatgtcattgacacgatcagttatccctgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGa < 1:879349‑M1/54‑1 (MQ=255) tctgtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAt < 1:1004806‑M1/57‑1 (MQ=255) tCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAt < 2:418257/140‑1 (MQ=255) aCTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGGGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAttt > 2:1133228/1‑140 (MQ=255) gtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTg < 2:1089137‑M1/60‑1 (MQ=255) gtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTg < 2:177660‑M1/60‑1 (MQ=255) gtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTg < 2:568156‑M1/60‑1 (MQ=255) gtcatttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTg < 2:640490‑M1/60‑1 (MQ=255) cTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGaaa > 2:813280/1‑127 (MQ=255) cTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGaaa < 1:813280/127‑1 (MQ=255) cTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTg > 2:427979/1‑140 (MQ=255) ttattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTg < 2:1151886‑M1/65‑1 (MQ=255) tattatgtcattgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGa > 1:206103‑M1/75‑140 (MQ=255) tAGATCCTAATATATCGCATTATTATTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGAt < 1:23392/140‑1 (MQ=255) tCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAgg < 2:127378/140‑1 (MQ=255) cTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCa > 1:908804/1‑140 (MQ=255) cattgacacgatcagttatccctgtgtctgcaacatttccacgagaaactatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAt > 1:727868‑M1/67‑140 (MQ=255) attgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt < 1:483893‑M1/75‑1 (MQ=255) attgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt < 1:717127‑M1/75‑1 (MQ=255) aaTATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt > 1:968974/1‑140 (MQ=255) aaTATATCGCATTATTTTTCCCGTTCAGCCCG‑TTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAttt > 2:1040249/1‑140 (MQ=255) tgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTc < 2:189667‑M1/77‑1 (MQ=255) tgacacgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTc > 2:607646‑M1/64‑140 (MQ=255) atCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCa < 1:828135/129‑1 (MQ=255) atCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCa > 2:828135/1‑129 (MQ=255) acgatcagttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGca < 2:1020040‑M1/81‑1 (MQ=255) cGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaa > 1:163429/1‑140 (MQ=255) cGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaa > 2:685100/1‑140 (MQ=255) cGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaa > 2:622160/1‑140 (MQ=255) cGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaa > 2:175593/1‑140 (MQ=255) agttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGc > 2:661018‑M1/54‑140 (MQ=255) ttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGc < 1:21854‑M1/87‑1 (MQ=255) ttatccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGc > 2:21854‑M1/52‑138 (MQ=255) atccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGt > 1:639813‑M1/50‑140 (MQ=255) tCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCG‑AAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTa < 2:1182792/140‑1 (MQ=255) ccctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGttt < 2:170250‑M1/93‑1 (MQ=255) cctgtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTa < 2:716364‑M1/94‑1 (MQ=255) gtgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTaaaa < 1:518570‑M1/97‑1 (MQ=255) tgtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTTCGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCCTTTCTGCAACAAGCCGGTTTaaaaa < 1:1001065‑M1/98‑1 (MQ=255) tCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt > 1:337126/1‑140 (MQ=255) tCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt > 1:1060788/1‑140 (MQ=255) tCAGCCCGTTTTTTGCCAGGCGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt > 2:648106/1‑140 (MQ=255) gtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt < 2:325885‑M1/99‑1 (MQ=255) gtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt < 1:778260‑M1/99‑1 (MQ=255) gtctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAt < 2:786891‑M1/99‑1 (MQ=255) tctgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAAtt < 2:1079818‑M1/100‑1 (MQ=255) tgcaacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTcc < 1:700144‑M1/102‑1 (MQ=255) aacatttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCTTTTCTGCAACAAGCCGGTTTAAAAATTCCTTc < 1:375188‑M1/105‑1 (MQ=255) atttccacgagaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTga < 2:892193‑M1/108‑1 (MQ=255) ttttGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTgaa > 2:1104163/1‑140 (MQ=255) agaagctatcattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGaaaaaaa < 2:946887‑M1/117‑1 (MQ=255) gAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATgg < 1:175593/140‑1 (MQ=255) tCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa < 1:998073/140‑1 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 2:240111‑M1/15‑140 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 1:892193‑M1/15‑140 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 2:58035‑M1/15‑140 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 1:412233‑M1/15‑140 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 1:189667‑M1/15‑140 (MQ=255) cattgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTa > 2:373875‑M1/15‑140 (MQ=255) ttgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACg > 1:116332‑M1/13‑140 (MQ=255) ttgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACg > 1:662199‑M1/13‑140 (MQ=255) accgacaGTCTCAGTAATTGGCGCAAAAACA‑GGCAACCTTGCTACGCGCTTTGATGCAAATGGCGACATTTGTATTGATCAGGCATTTCTGCAACATGCCGGTTTAAAAATTCCTTCTGATGAACAAAATGACTATTCCg > 2:391104/7‑140 (MQ=255) aCTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACg > 1:868667/1‑140 (MQ=255) aCTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACg > 1:645884/1‑140 (MQ=255) aCTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACg > 2:30207/1‑140 (MQ=255) tgttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGa > 1:557353‑M1/12‑140 (MQ=255) cTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGa > 2:977443/1‑140 (MQ=255) tGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGAc < 1:1104163/140‑1 (MQ=255) gttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGAc > 1:804145‑M1/11‑140 (MQ=255) ttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACt > 1:1122146‑M1/10‑140 (MQ=255) ttatatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACt > 1:1034847‑M1/10‑140 (MQ=255) gATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACt < 2:1086546/140‑1 (MQ=255) tAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtat > 1:1050275/1‑140 (MQ=255) atatctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtat < 2:627282‑M1/133‑1 (MQ=255) tctaAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtatata > 2:522510‑M1/5‑140 (MQ=255) tATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtatata < 2:867242/140‑1 (MQ=255) tATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtatata > 1:687173/1‑140 (MQ=255) ctaAGTAAATGGCGAAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACtatata > 2:1117497‑M1/4‑140 (MQ=255) aAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTg < 2:865762‑M1/139‑1 (MQ=255) AGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGt < 2:997484‑M1/140‑1 (MQ=255) | CCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAA‑GGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGT > NC_000913/3362862‑3363140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |