| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,978,503 | Δ776 bp | insB‑5–insA‑5 | insB‑5, insA‑5 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1978503–1979270 | 1979278 | 9–776 | 110 [1] | [0] 109 | insB‑5–insA‑5 | insB‑5,insA‑5 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1978502 | 1 (0.010) | 103 (0.940) | 59/262 | 0.4 | 99.5% | intergenic (‑305/+16) | flhD/insB‑5 | DNA‑binding transcriptional dual regulator FlhD/IS1 protein InsB |
| ? | NC_000913 | 1979279 = | 0 (0.000) | intergenic (‑64/‑474) | insA‑5/uspC | IS1 protein InsA/universal stress protein C | |||||
Only 100 of 110 total aligned reads displayed.
TCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTA > NC_000913/1978364‑1978638 | tCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGt < 1:1219998‑M1/140‑2 (MQ=255)tCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGt < 2:182373‑M1/140‑2 (MQ=255)tCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGt < 2:1607084‑M1/140‑2 (MQ=255) cTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGta < 1:991800‑M1/140‑3 (MQ=255) tttACGCTTATCTCAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtat < 1:1163512‑M1/140‑4 (MQ=255) tttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtat < 1:929153‑M1/140‑4 (MQ=255) ttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtata > 2:471489‑M1/1‑136 (MQ=255) cacTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagt < 2:283254‑M1/140‑8 (MQ=255) cacTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagt < 2:536532‑M1/140‑8 (MQ=255) cacTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagt < 1:242113‑M1/140‑8 (MQ=255) cTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtca < 2:1233259‑M1/140‑10 (MQ=255) ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcat > 2:784189‑M1/1‑130 (MQ=255) ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcat > 2:1076182‑M1/1‑130 (MQ=255) tATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcata > 2:1886874‑M1/1‑129 (MQ=255) aTCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatac > 1:1561945‑M1/1‑128 (MQ=255) aTCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatac > 2:216418‑M1/1‑128 (MQ=255) tCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatact > 2:1361009‑M1/1‑127 (MQ=255) ttttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgtttt < 2:1597846‑M1/140‑22 (MQ=255) ttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgg > 2:1096404‑M1/1‑117 (MQ=255) tCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttggg < 1:810417‑M1/140‑25 (MQ=255) tCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttggg > 1:794854‑M1/1‑116 (MQ=255) ccTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggt < 1:471489‑M1/140‑26 (MQ=255) ccTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggt < 2:501883‑M1/140‑26 (MQ=255) cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaat < 1:784189‑M1/140‑36 (MQ=255) cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaat > 1:1536238‑M1/1‑105 (MQ=255) aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctg < 2:78595‑M1/140‑39 (MQ=255) tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaa < 1:1881945‑M1/140‑44 (MQ=255) cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa > 2:34214‑M1/1‑95 (MQ=255) gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt > 2:1131829‑M1/1‑92 (MQ=255) gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt > 1:229604‑M1/1‑92 (MQ=255) cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttt > 1:1409031‑M1/1‑90 (MQ=255) cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttt > 1:1712747‑M1/1‑90 (MQ=255) cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc < 2:794854‑M1/140‑53 (MQ=255) tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg > 2:1158625‑M1/1‑87 (MQ=255) tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg > 2:524819‑M1/1‑87 (MQ=255) tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg > 2:380483‑M1/1‑87 (MQ=255) tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg > 1:523733‑M1/1‑87 (MQ=255) tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg > 2:1000765‑M1/1‑87 (MQ=255) acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta < 1:1352213‑M1/140‑57 (MQ=255) gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg > 2:77495‑M1/1‑82 (MQ=255) acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgct > 2:548746‑M1/1‑80 (MQ=255) tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc > 1:1899685‑M1/1‑77 (MQ=255) cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagca > 1:624218‑M1/1‑72 (MQ=255) gAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaa > 2:1185615‑M1/1‑70 (MQ=255) gAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaa > 1:1062346‑M1/1‑70 (MQ=255) ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTATAAGTCATACTTTTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACt > 2:1358254/1‑140 (MQ=9) ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa > 2:936729‑M1/1‑68 (MQ=255) gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat > 2:298423‑M1/1‑67 (MQ=255) ggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg > 1:1441538‑M1/1‑66 (MQ=255) ggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg > 1:401135‑M1/1‑66 (MQ=255) ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa > 1:600747‑M1/1‑64 (MQ=255) ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa > 2:42011‑M1/1‑64 (MQ=255) ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa > 2:830118‑M1/1‑64 (MQ=255) ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa > 2:744273‑M1/1‑64 (MQ=255) gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa < 1:1056413‑M1/140‑78 (MQ=255) gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatccgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa < 1:1587669‑M1/140‑78 (MQ=255) cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac > 2:1626857‑M1/1‑62 (MQ=255) cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac > 1:698068‑M1/1‑62 (MQ=255) cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac > 1:226527‑M1/1‑62 (MQ=255) ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaat < 2:1955177‑M1/140‑85 (MQ=255) ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataa > 2:1540965‑M1/1‑54 (MQ=255) ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataa < 1:1076182‑M1/140‑87 (MQ=255) tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat < 1:42011‑M1/140‑88 (MQ=255) aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa < 1:1158625‑M1/140‑93 (MQ=255) tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg > 1:409786‑M1/1‑46 (MQ=255) tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg < 1:548746‑M1/140‑95 (MQ=255) tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg < 2:600747‑M1/140‑95 (MQ=255) tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg > 1:172483‑M1/1‑46 (MQ=255) cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatggg < 2:624218‑M1/140‑97 (MQ=255) cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatggg < 1:1096404‑M1/140‑97 (MQ=255) cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat < 1:1583751‑M1/131‑88 (MQ=255) cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat > 2:1583751‑M1/1‑44 (MQ=255) gATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatg > 2:1967810‑M1/1‑41 (MQ=255) tGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgtt > 1:326035‑M1/1‑39 (MQ=255) gATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc < 2:1441538‑M1/140‑106 (MQ=255) gATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc < 1:1131829‑M1/140‑106 (MQ=255) gATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc < 2:913403‑M1/140‑106 (MQ=255) gATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc < 1:1095752‑M1/140‑106 (MQ=255) aTCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca > 2:716062‑M1/1‑34 (MQ=255) aTCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca > 2:742303‑M1/1‑34 (MQ=255) aTCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca < 2:409786‑M1/140‑107 (MQ=255) aTCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca > 2:1302532‑M1/1‑34 (MQ=255) cacacaAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcaca < 1:1763737‑M1/140‑109 (MQ=255) cacaAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagt < 2:234014‑M1/140‑111 (MQ=255) cacaAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagt < 2:401135‑M1/140‑111 (MQ=255) acaAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtc > 1:375654‑M1/1‑29 (MQ=255) acaAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagattttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtc > 1:1629582‑M1/1‑29 (MQ=255) acTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataa > 1:13285‑M1/1‑22 (MQ=255) acTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataa > 2:1292706‑M1/1‑22 (MQ=255) cTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataac < 2:1717111‑M1/140‑120 (MQ=255) cTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataac < 2:1330607‑M1/140‑120 (MQ=255) tCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataact > 2:151544‑M1/1‑20 (MQ=255) aTTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcac < 1:1375028‑M1/140‑124 (MQ=255) ttAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaa > 1:1291790‑M1/1‑12 (MQ=255) ttAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaa > 1:688187‑M1/1‑12 (MQ=255) aaCATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaat > 1:452905‑M1/1‑10 (MQ=255) aa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcttcgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat < 2:326035‑M1/140‑137 (MQ=255) aa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat < 2:229604‑M1/140‑137 (MQ=255) aa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat < 1:298423‑M1/140‑137 (MQ=255) aa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat < 1:34214‑M1/140‑137 (MQ=255) | TCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTA > NC_000913/1978364‑1978638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |