Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423770–3424234	3424526–3424238	5–757	37 [27]	[31] 36	[rrfD]–[rrlD]	[rrfD],[rrlD]

CTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA  >  NC_000913/3424513‑3424666               |                                                                                                                                             ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCt                >  2:1126323/1‑140 (MQ=11)  tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTa               <  1:1389456/140‑1 (MQ=31)    tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAg             <  1:1936820/140‑1 (MQ=33)      tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc           >  1:1198071/1‑140 (MQ=32)      tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc           >  2:640152/1‑140 (MQ=32)      tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc           <  2:1033745/140‑1 (MQ=33)      tAGGAGGAGACCGCCCAAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc           >  1:1265565/1‑140 (MQ=17)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  2:1360544/140‑1 (MQ=33)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  1:85359/140‑1 (MQ=33)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  1:863159/140‑1 (MQ=33)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  1:456425/140‑1 (MQ=33)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  2:1244165/140‑1 (MQ=33)       aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  2:981890/140‑1 (MQ=32)        ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt          <  1:1171683/140‑1 (MQ=18)         gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc        <  1:157377/140‑1 (MQ=33)           ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa      >  2:851097/1‑140 (MQ=32)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  2:1248786/140‑1 (MQ=33)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:716166/140‑1 (MQ=33)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  2:1687534/140‑1 (MQ=32)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  2:856972/140‑1 (MQ=32)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:568295/140‑1 (MQ=33)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     >  1:421368/1‑140 (MQ=32)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:1326894/140‑1 (MQ=33)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:1240885/140‑1 (MQ=32)            gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:1173726/140‑1 (MQ=33)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  1:1696561/138‑1 (MQ=33)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     >  2:1696561/1‑138 (MQ=32)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt   >  1:1620645/1‑140 (MQ=32)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt   >  2:156942/1‑140 (MQ=32)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt   >  2:43954/1‑140 (MQ=32)              gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt   >  1:1223546/1‑140 (MQ=32)               aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa  <  1:1961981/140‑1 (MQ=33)               aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa  >  1:1877822/1‑140 (MQ=32)               aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa  <  1:156942/140‑1 (MQ=33)               aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa  >  2:349381/1‑140 (MQ=32)               aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa  <  2:835766/140‑1 (MQ=32)               |                                                                                                                                             CTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTC‑GGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA  >  NC_000913/3424513‑3424666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑