Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,667,126	0	A	C	21.9%	179.5 / 12.2	82	Y241D (TAT→GAT)	hcaT	putative 3‑phenylpropionate transporter
Reads supporting (aligned to +/- strand):  ref base A (43/21);  new base C (0/18);  total (43/39)
Fisher's exact test for biased strand distribution p-value = 1.07e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAG  >  NC_000913/2666991‑2667263                                                                                                                                         |                                                                                                                                          cTCCCCAAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCACAAGCAGATCCGGTGCCCTCCACCGGTGGAAAGGTTTATAAGTCAG‑TAAAAGAAAAGGGAATTCCACCACAAAGCCAAGCGTCCACAAACAcccc                                                                                                                                       <  2:1735400/140‑1 (MQ=255)      aTAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCAccgc                                                                                                                                  <  2:1046419/140‑1 (MQ=255)      aTAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAACATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCAccgc                                                                                                                                  <  1:1669977/140‑1 (MQ=255)       tAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCAccgcc                                                                                                                                 >  1:736267/1‑140 (MQ=255)          tGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTCCTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgag                                                                                                                              <  2:847318/140‑1 (MQ=255)          tGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTACTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCgccgag                                                                                                                              <  1:1593135/140‑1 (MQ=255)           gCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgagg                                                                                                                             >  1:488853/1‑140 (MQ=255)            ccccAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgaggc                                                                                                                            >  2:1845824/1‑140 (MQ=255)              ccAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgaggccg                                                                                                                          >  1:2114120/1‑140 (MQ=255)              ccAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgaggccg                                                                                                                          >  2:1685217/1‑140 (MQ=255)              ccAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgaggccg                                                                                                                          >  2:1699999/1‑140 (MQ=255)                aGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCgccgaggccgag                                                                                                                        <  2:1870590/140‑1 (MQ=255)                aGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCgccgaggccgag                                                                                                                        >  1:2219787/1‑140 (MQ=255)                   gcACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCCCCCCGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAg                                                                                                                     <  2:304966/140‑1 (MQ=255)                    cACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGc                                                                                                                    >  1:810398/1‑140 (MQ=255)                         cgccgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGct                                                                                                               <  2:736267/140‑1 (MQ=255)                           ccgaAAACCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGAAAAATTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGctgc                                                                                                             <  2:2407383/140‑1 (MQ=255)                            cgcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGctgcc                                                                                                            >  1:264544/1‑140 (MQ=255)                            cgcAAATCGCAGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGctgcc                                                                                                            <  1:1134907/140‑1 (MQ=255)                             gcAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGctgcct                                                                                                           <  2:810398/140‑1 (MQ=255)                              cAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTCCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGctgcctg                                                                                                          <  2:488853/140‑1 (MQ=255)                                       gagaTCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAAt                                                                                                 <  1:1376307/140‑1 (MQ=255)                                               cAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCtga                                                                                         <  1:879513/140‑3 (MQ=255)                                                 gCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTaaaa                                                                                       <  2:2114120/140‑1 (MQ=255)                                                    tatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCg                                                                                    >  1:79105/1‑140 (MQ=255)                                                    tatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCg                                                                                    >  1:864492/1‑140 (MQ=255)                                                    tatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCg                                                                                    >  1:496719/1‑140 (MQ=255)                                                         cgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATa                                                                               >  2:1323835/1‑140 (MQ=255)                                                         cgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATa                                                                               >  2:2294689/1‑140 (MQ=255)                                                         cgTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTACCTGCCAGTAAATGGCGCTAAAACCGTAATa                                                                               >  1:732321/1‑140 (MQ=255)                                                            gCACTACAACGGCTGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc                                                                            <  1:2273121/140‑1 (MQ=255)                                                            gCACTACAACGGCGGAATAGTTTATTACTCAGCGCAAAGATAA‑TGACTTTCGCGACCACGCCCAGCGACCCCAAATACCACACCCCCGAGGCCGAGGAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTaaatggc                                                                            >  2:832778/1‑135 (MQ=255)                                                            gCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc                                                                            <  2:496719/140‑1 (MQ=255)                                                            gCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc                                                                            >  1:1073065/1‑140 (MQ=255)                                                            gCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGc                                                                            <  1:1845824/140‑1 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCCCCACGCCCGGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  1:357118/140‑1 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCCCCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  2:1988291/140‑1 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGctg                                                                          <  1:2117668/140‑3 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  1:1699999/140‑1 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  1:1105453/140‑1 (MQ=255)                                                              aCTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  1:1685217/140‑1 (MQ=255)                                                                    ccggcggAAAAGTTTCTTCCCCAGCGCAAAGATAA‑TGACTCCCGCCACCCCGCCCAGCGCCCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCAtgtg                                                                    <  2:264544/139‑1 (MQ=255)                                                                        cggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc                                                                <  2:1073065/140‑1 (MQ=255)                                                                        cggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc                                                                <  1:665693/140‑1 (MQ=255)                                                                        cggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc                                                                >  2:555330/1‑140 (MQ=255)                                                                        cggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc                                                                >  2:738428/1‑140 (MQ=255)                                                                        cggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGcccc                                                                >  2:781356/1‑140 (MQ=255)                                                                         ggAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGCCCACAAATCCCCCCCCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGccccc                                                               <  2:1812099/140‑1 (MQ=255)                                                                          gAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          <  2:1367226/128‑1 (MQ=255)                                                                          gAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCg                                                                          >  1:1367226/1‑128 (MQ=255)                                                                          gAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCt                                                              >  2:862696/1‑140 (MQ=255)                                                                          gAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCt                                                              >  2:1951920/1‑140 (MQ=255)                                                                          gAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCt                                                              >  2:1365998/1‑140 (MQ=255)                                                                            aaaGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGc                                                            <  2:2219787/140‑1 (MQ=255)                                                                                         cAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc                                               <  2:864492/140‑1 (MQ=255)                                                                                         cAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc                                               >  2:1128719/1‑140 (MQ=255)                                                                                         cAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGc                                               >  2:700283/1‑140 (MQ=255)                                                                                            cgcAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCAc                                                                                                                                     >  1:2034678/1‑51 (MQ=255)                                                                                            cgcAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCAc                                                                                                                                     <  2:2034678/51‑1 (MQ=255)                                                                                            cgcAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAgg                                            >  2:625074/1‑140 (MQ=255)                                                                                            cgcAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAgg                                            >  2:1736448/1‑140 (MQ=255)                                                                                            cgcAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAgg                                            >  1:992528/1‑140 (MQ=255)                                                                                                  gATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGaa                                      <  1:1418488/140‑1 (MQ=255)                                                                                                        tGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAgcgc                                 <  1:781356/140‑1 (MQ=255)                                                                                                            ttCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGt                             <  1:435942/140‑1 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  2:107592/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  2:1613517/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  2:1406731/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  1:46909/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  1:1320178/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  1:1533648/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTc                           >  1:132892/1‑140 (MQ=255)                                                                                                              ccGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGACCAGAAAGCGCCAGTTc                           >  1:153267/1‑140 (MQ=255)                                                                                                                    ccacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGa                     >  2:2452237/1‑140 (MQ=255)                                                                                                                    ccacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGa                     >  2:748211/1‑140 (MQ=255)                                                                                                                     cacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGaa                    >  2:601579/1‑140 (MQ=255)                                                                                                                     cacGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGaa                    >  2:96404/1‑140 (MQ=255)                                                                                                                       cGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAAcc                  <  1:862696/140‑1 (MQ=255)                                                                                                                          ccAGCGACCACAAATCCCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgc               <  1:1406731/140‑1 (MQ=255)                                                                                                                          ccAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgc               <  2:153267/140‑1 (MQ=255)                                                                                                                            aGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAgcgc             >  2:1808896/1‑140 (MQ=255)                                                                                                                              cGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCa           <  1:1323835/140‑1 (MQ=255)                                                                                                                               gACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCaa          <  1:1613517/140‑1 (MQ=255)                                                                                                                               gACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCaa          <  2:992528/140‑1 (MQ=255)                                                                                                                                     aaaTACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGc    <  1:1365998/140‑1 (MQ=255)                                                                                                                                       aTACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAg  >  1:198045/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                          CTCCCATAATGCCCCAGCGCACTACGCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAGATAA‑TGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCACCGCCGAGGCCGAGTAGCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCCAGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAG  >  NC_000913/2666991‑2667263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑