BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,669,638	T→G	I16S (ATC→AGC)	treF →	cytoplasmic trehalase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,669,638	0	T	G	100.0%	424.2 / NA	114	I16S (ATC→AGC)	treF	cytoplasmic trehalase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (45/69); total (45/69)

Only 100 of 120 total aligned reads displayed.

CGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGATCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAA  >  NC_000913/3669503‑3669774

cGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGaa                                                                                                                                      >  1:643389/1‑140 (MQ=255)

 gCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAg                                                                                                                                     <  2:1898314/140‑1 (MQ=255)

    cGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCg                                                                                                                                  <  1:650064/140‑1 (MQ=255)

      cTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAt                                                                                                                                <  1:722380/140‑1 (MQ=255)

       tttGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAtc                                                                                                                               >  1:112255/1‑140 (MQ=255)

        ttGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAtct                                                                                                                              <  1:247571/140‑1 (MQ=255)

        ttGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAtct                                                                                                                              <  2:222910/140‑1 (MQ=255)

         tGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAtctc                                                                                                                             >  2:1628804/1‑140 (MQ=255)

          gTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATctct                                                                                                                            >  1:1773255/1‑140 (MQ=255)

             gCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCt                                                                                                                         <  2:1506635/140‑1 (MQ=255)

              cccACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTa                                                                                                                        <  1:1324117/140‑1 (MQ=255)

              cccACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTa                                                                                                                        >  2:1851367/1‑140 (MQ=255)

              cccACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTa                                                                                                                        <  1:715310/140‑1 (MQ=255)

              cccACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTa                                                                                                                        <  1:2399448/140‑1 (MQ=255)

              cccACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTa                                                                                                                        <  1:588986/140‑1 (MQ=255)

                 accaGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGa                                                                                                                     >  1:1157445/1‑140 (MQ=255)

                 accaGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGa                                                                                                                     >  1:417312/1‑140 (MQ=255)

                  ccaGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAg                                                                                                                    <  1:546760/140‑1 (MQ=255)

                   caGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGc                                                                                                                   >  1:502329/1‑140 (MQ=255)

                    aGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCt                                                                                                                  <  2:1773255/140‑1 (MQ=255)

                     ggCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTg                                                                                                                 <  2:349823/140‑1 (MQ=255)

                      gCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTgg                                                                                                                <  1:2297338/140‑1 (MQ=255)

                       cGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGa                                                                                                               <  2:647837/140‑1 (MQ=255)

                       cGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGa                                                                                                               <  1:870248/140‑1 (MQ=255)

                        ggAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGAc                                                                                                              <  1:273931/140‑1 (MQ=255)

                         gAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGAcc                                                                                                             >  2:2183689/1‑140 (MQ=255)

                             gAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTa                                                                                                         <  1:2300775/140‑1 (MQ=255)

                             gAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTa                                                                                                         <  1:1635016/140‑1 (MQ=255)

                             gAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTa                                                                                                         <  1:550857/140‑1 (MQ=255)

                             gAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTa                                                                                                         <  1:1767980/140‑1 (MQ=255)

                             gAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTa                                                                                                         <  1:1851367/140‑1 (MQ=255)

                                    tACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTa                                                                                                  >  2:792289/1‑140 (MQ=255)

                                      cccTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTaaa                                                                                                <  2:1157445/140‑1 (MQ=255)

                                      cccTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTaaa                                                                                                >  1:1939129/1‑140 (MQ=255)

                                       ccTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGAACTCTGCTATGAGCTGGACCCGTATGAATTaaaa                                                                                               <  2:2346655/140‑1 (MQ=255)

                                        cTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAAc                                                                                              <  2:1819974/140‑1 (MQ=255)

                                        cTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAAc                                                                                              <  1:1622534/140‑1 (MQ=255)

                                        cTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAAc                                                                                              <  2:768841/140‑1 (MQ=255)

                                         ttAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACt                                                                                             >  1:86046/1‑140 (MQ=255)

                                          tAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTg                                                                                            >  2:56352/1‑140 (MQ=255)

                                           aaaGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTgg                                                                                           >  1:1593475/1‑140 (MQ=255)

                                           aaaGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTgg                                                                                           >  2:594785/1‑140 (MQ=255)

                                            aaGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGga                                                                                          <  2:2158620/140‑1 (MQ=255)

                                            aaGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATAAATTAAAACTGga                                                                                          <  1:354873/140‑1 (MQ=255)

                                                aaaGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGgatgag                                                                                      >  2:2119592/1‑140 (MQ=255)

                                                 aaGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGgatgaga                                                                                     >  1:25888/1‑140 (MQ=255)

                                                 aaGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGgatgaga                                                                                     >  2:14655/1‑140 (MQ=255)

                                                  aGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGgatgagat                                                                                    >  1:2292902/1‑140 (MQ=255)

                                                    ccGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGgatgagatga                                                                                  >  2:915725/1‑140 (MQ=255)

                                                     cGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAgatgat                                                                                 <  2:2292902/140‑1 (MQ=255)

                                                     cGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAgatgat                                                                                 >  1:1185773/1‑140 (MQ=255)

                                                      gATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATc                                                                                <  1:952284/140‑1 (MQ=255)

                                                       aTAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCg                                                                               >  2:2232487/1‑140 (MQ=255)

                                                          aTTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAgg                                                                            <  2:974665/140‑1 (MQ=255)

                                                           ttAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTAAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGc                                                                           <  1:119261/140‑1 (MQ=255)

                                                             aGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAg                                                                         >  2:691458/1‑140 (MQ=255)

                                                              gCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGa                                                                        >  1:1227811/1‑140 (MQ=255)

                                                                gacgaATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAAc                                                                      <  2:25888/140‑1 (MQ=255)

                                                                 acgaATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAAcc                                                                     >  2:634804/1‑140 (MQ=255)

                                                                  cgaATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAAcag                                                                    >  2:863643/1‑138 (MQ=255)

                                                                   gaATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCgg                                                                   <  2:643389/140‑1 (MQ=255)

                                                                             ggTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAgat                                                         <  1:915725/140‑1 (MQ=255)

                                                                              gTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAgatg                                                        >  2:2329077/1‑140 (MQ=255)

                                                                                 ggATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGAtt                                                     <  1:800490/140‑1 (MQ=255)

                                                                                 ggATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGAGCGAGGCAGAACCGGAACCCGAGATGAtt                                                     <  2:815088/140‑1 (MQ=255)

                                                                                 ggATCCTTATGCTCAATCAGAAAATTCAAAACCCGAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGAtt                                                     <  1:2119592/140‑1 (MQ=255)

                                                                                  gATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTg                                                    <  2:1939129/140‑1 (MQ=255)

                                                                                    tCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGaa                                                  <  1:1173474/140‑1 (MQ=255)

                                                                                       ttATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAggg                                               <  2:289293/140‑1 (MQ=255)

                                                                                       ttATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAggg                                               <  1:2232487/140‑1 (MQ=255)

                                                                                            cTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGctgcc                                          <  1:787332/140‑1 (MQ=255)

                                                                                               aaTCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGctgcctgc                                       >  2:342646/1‑140 (MQ=255)

                                                                                               aaTCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGctgcctgc                                       <  2:2040377/140‑1 (MQ=255)

                                                                                               aaTCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGctgcctgc                                       >  2:1579302/1‑140 (MQ=255)

                                                                                                      aaaTTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGAt                                <  1:1261883/140‑1 (MQ=255)

                                                                                                      aaaTTCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGAt                                <  1:649654/140‑1 (MQ=255)

                                                                                                         ttCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATgcg                             <  1:1579302/140‑1 (MQ=255)

                                                                                                          tCAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATgcgc                            <  2:1227811/140‑1 (MQ=255)

                                                                                                           cAAAACCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCt                           <  1:14655/140‑1 (MQ=255)

                                                                                                             aaaCCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGa                         >  1:1860576/1‑140 (MQ=255)

                                                                                                             aaaCCCTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGa                         >  1:1974097/1‑140 (MQ=255)

                                                                                                                cccTAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGc                      <  2:1185773/140‑1 (MQ=255)

                                                                                                                   tAATCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTg                   >  1:2311561/1‑140 (MQ=255)

                                                                                                                    aaTCCAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGc                  <  2:675048/140‑1 (MQ=255)

                                                                                                                        cAGACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGAt              >  2:707233/1‑140 (MQ=255)

                                                                                                                          gACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCg            <  1:1793474/140‑1 (MQ=255)

                                                                                                                          gACGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCg            <  1:2183689/140‑1 (MQ=255)

                                                                                                                           aCGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGc           >  2:2203980/1‑140 (MQ=255)

                                                                                                                           aCGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGc           >  1:983834/1‑140 (MQ=255)

                                                                                                                           aCGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGc           >  2:2131761/1‑140 (MQ=255)

                                                                                                                            cGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCt          <  2:417312/140‑1 (MQ=255)

                                                                                                                            cGAACTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCt          <  1:2329077/140‑1 (MQ=255)

                                                                                                                               aCTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTAtc       >  2:1173660/1‑140 (MQ=255)

                                                                                                                               aCTGATGAGCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTAtc       >  2:151192/1‑140 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  1:1244283/140‑1 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  1:151192/140‑1 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  1:691458/140‑1 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  1:241203/140‑1 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  1:594785/140‑1 (MQ=255)

                                                                                                                                    tgagCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGaa  <  2:983834/140‑1 (MQ=255)

CGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGATCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAA  >  NC_000913/3669503‑3669774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`