Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913753,1250TA34.4% 102.9 / 30.3 61intergenic (‑330/+60)ybgD/gltAputative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (36/4);  new base A (0/21);  total (36/25)
Fisher's exact test for biased strand distribution p-value = 1.04e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752995‑753264
                                                                                                                                  |                                                                                                                                           
aTGCGATTACAATAAATTTTTTAATTGAAAGTATTGGTTTGCTGATATTTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTTTTTTAATGTTTTTTTTTTTTAAATTTTTTTGTGTTTAGGCATAAAAAAATCaa                                                                                                                                    <  2:1113750/140‑1 (MQ=255)
  gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  2:872475/1‑140 (MQ=255)
  gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  1:28291/1‑140 (MQ=255)
  gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  2:565525/1‑140 (MQ=255)
  gCGACTACAATAAATTTTTTAATTAAAATTTTTGGGTTGCTAATAATTTGAGCTTTTTTTTTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTAAAATTTTTTGTTTTTAGGCATAAAAAAATCAccc                                                                                                                                  <  2:1056172/140‑1 (MQ=255)
   cGATTACAATGAAGTTTTTAATAAAAAGTATTGGGTTGCTGATAATTTGAGCTGTTTTATTCTTTTTAAATATCTATATAGGTTTTTTAATGGTTTTTTTTTTTACAATTTTTTGTTTTTAGGCATAAAAAAACCAAccc                                                                                                                                 <  2:1791137/140‑1 (MQ=255)
    gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                >  1:849590/1‑140 (MQ=255)
     actccaaTGAATTTTTTAATTGAAATTTTTGGGTTGCTGATAATTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGCATAAAAAAACCACCCCGc                                                                                                                               <  2:616808/134‑1 (MQ=255)
     aCTACCATGAATTTTTTAATTAAAAGTATTGGGTTGCTGATATTTTGAGTTTTTCTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACATTTTTTTGTTTTTAGGAATAAAAAAATCACCCCGc                                                                                                                               <  2:1016691/140‑1 (MQ=255)
      cTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGcc                                                                                                                              >  1:1670383/1‑140 (MQ=255)
       tACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCa                                                                                                                             >  1:1699151/1‑140 (MQ=255)
              atttttttAATTAAAATTTTGGGTTTGTTGATATTTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGTTTTTTTTTTTAAATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAAc                                                                                                                      <  2:849590/137‑1 (MQ=255)
                ttttttAATTAAAAGTTTGGGGTTGTTGATATTTTGAGCTTTTCTTTTTTTTTAAAATATTTATATAGGTTTGTTAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTAGGAATAAAAAAACCAACCCGCCATATGAAcgg                                                                                                                    <  2:615995/139‑1 (MQ=255)
                   tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAcggcgg                                                                                                                 >  2:1424631/1‑140 (MQ=255)
                      aaTTGAAAGTATTGGGTTGATGATATTTTGGGCTTTTTTTTTTTTTTAAAATATCTATATAGGTTTTTTAATGGATTTTTTTTTTAAAATTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGtt                                                                                                              <  2:919213/140‑1 (MQ=255)
                         tGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTTTTTTTACATTTTTTTGTGTTTAGGAATATAAAAATCACCCCGCCATATGAACGGCGGGTTaaa                                                                                                           <  1:123243/140‑1 (MQ=255)
                           aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTaaaaa                                                                                                         >  2:1504950/1‑139 (MQ=255)
                              ttATTGGGTTGCTGATATTTTGAGTTTTTTTTTTTTTTTAAAATATTTATATGGTTTTTTTAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTAGGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATAtt                                                                                                      <  2:1709125/139‑1 (MQ=255)
                                      ttgttaatatTTTGAGTTTTTTTATTTTTTTAAAATATTTATATAGGTTTTTTAATGGTTTTTTTTTTTACATTTTTTTGTGTTTAGACATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                              <  2:1090899/134‑1 (MQ=255)
                                      ttGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                              >  1:1486879/1‑140 (MQ=255)
                                       tGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTa                                                                                             >  2:1029393/1‑140 (MQ=255)
                                         cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                           >  1:820077/1‑140 (MQ=255)
                                              aaTTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCa                                                                                      >  1:312302/1‑140 (MQ=255)
                                                 ttGAGTTGTTCTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACAATTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAcc                                                                                   <  1:1135825/140‑1 (MQ=255)
                                                   gAGCTGTTCTTTTTTTTTTAAATATCTATATAGGTCTGTTAATGAATTTTATTTTTACAATTTTTTGTTTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                                 <  1:1424631/140‑1 (MQ=255)
                                                     gCTGTTCTATTTTTTTAAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                               <  1:565525/140‑1 (MQ=255)
                                                     gCTGTTCTATTCTTTTAAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACATTTTTTTGTTTTTAGGAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                               <  1:1302163/140‑1 (MQ=255)
                                                        gTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGCGTTTAACACTTCCAACTTAGGAAAAAAACAATAACg                                                                            >  2:281825/1‑140 (MQ=255)
                                                                   tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATTGc                                                                 >  2:1016394/1‑140 (MQ=255)
                                                                   tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:1019732/1‑140 (MQ=255)
                                                                   tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:96246/1‑140 (MQ=255)
                                                                           tCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAg                                                         >  1:125689/1‑140 (MQ=255)
                                                                            ttatataGTTTTTTTAATGTTTTTTTTTTTTAAAATTTTTTGTTTTTAGGAAAAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGt                                                        <  2:1699151/139‑1 (MQ=255)
                                                                             tatataGGTTTGTTAATGGATTTTATTTTTAAAATTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTc                                                       <  1:984971/140‑1 (MQ=255)
                                                                             tatataGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTc                                                       >  1:1450354/1‑140 (MQ=255)
                                                                                 tagttttGTTAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                   <  1:497674/134‑1 (MQ=255)
                                                                                    gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTTCAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  2:520023/1‑140 (MQ=255)
                                                                                    gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGTGtttt                                                >  1:1469177/1‑140 (MQ=255)
                                                                                    gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:1516646/1‑140 (MQ=255)
                                                                                    gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAACATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:813700/1‑140 (MQ=255)
                                                                                     tCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                               >  1:738486/1‑140 (MQ=255)
                                                                                     tCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                               >  1:1425759/1‑140 (MQ=255)
                                                                                      tttttAATGTTTTTTTTTTTTAAATTTTTTTGTTTTTAGCAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  2:96246/137‑1 (MQ=255)
                                                                                      tttttAATGGTTTTTATTTTTACAATTTTTTGTTTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGTGTTTTTc                                              <  2:1469177/137‑1 (MQ=255)
                                                                                      cTGTTAATGGATTTTATTTTTACAATTTTTTGTTTTTAAGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  1:1143200/140‑1 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:1352304/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:1392912/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:177505/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:260648/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAATCGCGTTTTTCa                                             >  2:1074484/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTGAAATATTTACCAACTACCAAACAACCATTAATGCTTGGTATTGCTTTTTAAATCGCGTGTTTCa                                             >  2:815553/1‑140 (MQ=255)
                                                                                       tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATTTTTACAACTTAGCAATCAAACATTAAAGCTTGATATCGCTTTTTAAGTCGCGTTTTTCa                                             >  2:1661993/1‑140 (MQ=255)
                                                                                        tttAATGTTTTTTTTTTTTAAATTTTTTTGTTTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:1670383/139‑1 (MQ=255)
                                                                                        tttAATGTATTTTATTTTTACATTTTTTTGTGTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:312302/139‑1 (MQ=255)
                                                                                         ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:220866/1‑140 (MQ=255)
                                                                                           aaTGGATTTTTTTTTTAAAATTTTTTGTGTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:872475/140‑1 (MQ=255)
                                                                                           aaTGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         >  1:1012116/1‑140 (MQ=255)
                                                                                                   ttattttTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAATCGCGTTTTTCATATCCTGTATAc                                 >  1:589471/1‑140 (MQ=255)
                                                                                                         ttACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGATTGAAATCCCTTTTAAAGTCGCGTTTTTTATAACCTGTATACAGCtta                           >  2:1024672/1‑138 (MQ=255)
                                                                                                             atttttttttGTTTAGGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                       <  2:87519/138‑1 (MQ=255)
                                                                                                              aTTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCgg                      <  1:260648/140‑1 (MQ=255)
                                                                                                               ttttttGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGa                     <  2:1450354/140‑1 (MQ=255)
                                                                                                               ttttttGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGa                     <  1:1352304/140‑1 (MQ=255)
                                                                                                                tttttGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGAc                    <  1:30314/140‑1 (MQ=255)
                                                                                                                    tgttTTTAGGAAAATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:916779/140‑1 (MQ=255)
                                                                                                                    tgttTTTAGGAAAAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:813700/140‑1 (MQ=255)
                                                                                                                    tgtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTAAAAATTTGAAAATAATTAATAAAGTTTTTTTTCGCTTTTAAAATCGCGCTTTTTAAATCCTGTATTCAACTTACGCCGACGGGc                >  2:1108128/1‑140 (MQ=255)
                                                                                                                          tAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt          <  2:1023877/140‑1 (MQ=255)
                                                                                                                           aGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTc         >  1:1238220/1‑140 (MQ=255)
                                                                                                                                tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc    >  1:544068/1‑140 (MQ=255)
                                                                                                                                  taAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt  >  2:129516/1‑140 (MQ=255)
                                                                                                                                  |                                                                                                                                           
ATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752995‑753264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑