| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,628,649 | 0 | A | C | 25.7% | 162.6 / 13.7 | 74 | intergenic (+102/+206) | nadR/ettA | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (47/8); new base C (0/19); total (47/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.04e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628511‑4628788 | ggAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑c < 2:369834/140‑1 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGGAAAAA‑CCTGCACg > 1:1070141/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 2:1567197/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 1:231007/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 1:1322740/1‑140 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑Ga > 1:1108199/1‑140 (MQ=255) agaTGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GAcc < 1:517566/140‑1 (MQ=255) agaTGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GAcc > 1:1635062/1‑140 (MQ=255) agaTGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GAcc > 1:1774171/1‑140 (MQ=255) tgatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGc > 1:475702/1‑140 (MQ=255) gatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGcc > 1:1680/1‑140 (MQ=255) atgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGG‑T‑GACCCGCCa < 1:1499520/140‑1 (MQ=255) gaaGCAGAGATAACCGTGATAAAACTCCTAAAAGGCGAGGTAAAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATTAAACAGGGTTTAAAAAAC‑CCTGCAGGGG‑T‑GCCCCGCCACGaaa < 2:1391076/138‑1 (MQ=255) gCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTg > 2:136521/1‑140 (MQ=255) cAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGa > 2:1395249/1‑140 (MQ=255) cAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGa > 2:838864/1‑140 (MQ=255) agagATACCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAg < 1:523372/140‑1 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAg < 1:88211/140‑1 (MQ=255) aTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATg > 2:357051/1‑140 (MQ=255) accggTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAAC‑CCTGCACGGG‑T‑GCCCCGCCACGAAATTGAGGATGCt < 1:1356977/136‑1 (MQ=255) aaCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCt < 1:1567197/140‑1 (MQ=255) aaCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAA‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCt < 1:310999/140‑1 (MQ=255) ccGTGATGAAACTACTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTaa > 2:725813/1‑140 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCt > 1:266462/1‑140 (MQ=255) atgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCtg > 1:520553/1‑140 (MQ=255) tgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCtgt > 2:1074102/1‑140 (MQ=255) tgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCtgt > 1:612622/1‑140 (MQ=255) aCTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTa > 1:229783/1‑140 (MQ=255) gCTCAAGGGGGAGGTAAAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTGGAGATTAAACAGGGTTTAAAAAAC‑CCTGCGCGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAc < 2:877274/140‑1 (MQ=255) cTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc > 2:215101/1‑140 (MQ=255) tCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg < 1:1504806/140‑1 (MQ=255) aaaaaGGGGAGGTAAAAAATGATTTTTTTTGAGGATTTAAAACCCTCTCTGAAGGAGGCTGTGGAAATAAAACAAGTTTTAAAAAAA‑CCTGCCCGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg < 2:896731/138‑1 (MQ=255) aaGGCGAGTTATAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGaa < 1:904405/140‑1 (MQ=255) ggCGAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGTTTTGAAAAAC‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAAc < 1:838864/140‑1 (MQ=255) ggCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAAc < 1:101615/140‑1 (MQ=255) gCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACg < 2:266462/140‑1 (MQ=255) gggggTAAAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGTTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACgg < 1:942355/137‑1 (MQ=255) ggAGGTAAAAAATGATTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGGGGCTGTCGAAATAAAACAAGGTTAAAAAAAC‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACgg < 2:1774171/139‑1 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCGACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg > 2:1144961/1‑140 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg > 2:1578011/1‑140 (MQ=255) taAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAc > 2:752579/1‑140 (MQ=255) taAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAc > 2:447953/1‑140 (MQ=255) aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt > 2:629992/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:917453/1‑140 (MQ=255) ttttGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGc > 2:1145296/1‑140 (MQ=255) tgatgaGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCCGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 1:1074102/140‑1 (MQ=255) tgatgaGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATAAAACAAGTTTTAAAAAAC‑CCTGCACGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 1:1075090/140‑1 (MQ=255) atgaGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAAAAAGGTTTAAAAAAC‑CCTGCACGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCg < 1:1522887/140‑1 (MQ=255) tgaGTTAAAACCCTCTCGGGAAGGGGCTGTCGAAATAAAACAGGGTTGAAAAAAC‑CCTGCAGGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 1:928060/140‑1 (MQ=255) tgaGTTAAAACCCTCTCGGGAAGAGGCTGTGGAGATAAAACAGGTTTTAAAAAAC‑CCTGCAGGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 1:357051/140‑1 (MQ=255) tgaGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATAAAAAAAGGTTTAAAAAAC‑CCTGCCGGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 2:612622/140‑1 (MQ=255) ggaGTTGAAAGCGTCGGTAGAGGAGGCCGGCGAGATAAAAAAGGTTTTGAAAAGC‑CGTGCCGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 2:1410902/139‑1 (MQ=255) ttGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 1:759513/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 2:857460/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 1:694273/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 2:1754430/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 1:1173558/1‑140 (MQ=255) tcggaaaGGGGATGTGGAAATAAAACAAGGTTAAAAAAAC‑CATGCGGGGG‑G‑ACCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGAt < 2:195934/135‑1 (MQ=25) ggggAAGGGGCTGTGGAAATAAAACAGGGTTAAAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATg < 2:88089/138‑1 (MQ=38) gAAGAGGCTGTCGAGATAAAACAGGGTTTGAAAAAC‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGa < 1:1027009/140‑1 (MQ=255) gagGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGc > 2:1708027/1‑140 (MQ=255) ggCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCtt > 1:195934/1‑140 (MQ=255) gCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa > 1:1442348/1‑140 (MQ=255) tGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc > 2:1653157/1‑140 (MQ=255) tGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc > 1:50317/1‑140 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 1:1131082/1‑140 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 1:612511/1‑140 (MQ=255) gaaataaaaCAGGGTTTGAAAAAC‑CCTGCCCGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 1:1626538/134‑1 (MQ=38) gagatAAAAAAGGTTTGAAAAAA‑CCCGCCCGGGTT‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:789162/136‑1 (MQ=38) aTTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCtt > 1:369865/1‑140 (MQ=255) ttAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTa > 2:990232/1‑140 (MQ=255) tAAACAGGTTTTGAAAAAC‑CCTGCCCGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 1:136521/140‑1 (MQ=38) tAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt > 1:1304191/1‑140 (MQ=255) aaaaaaaGGTTTAAAAAAC‑CCTGCGCGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 1:1297102/139‑1 (MQ=255) aaaaaGGTTTAAAAAAACCCTGCGGGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATc < 2:1173558/137‑1 (MQ=37) aaaaaGGTTAAAAAAAT‑CCTAC‑CGGG‑TCGTCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCa < 1:548761/137‑1 (MQ=25) aCAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAg > 1:1663400/1‑140 (MQ=255) gggTTTAAAAAAC‑CCTGCAGGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc < 2:229783/139‑1 (MQ=255) aGGTTTGAAAAAC‑CCTGCACGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc < 1:629992/140‑1 (MQ=255) aGGTTTGAAAAAC‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc < 1:457835/140‑1 (MQ=255) aGGTTTAAAAAAC‑CCTGCGGGGG‑A‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc < 2:917453/140‑1 (MQ=37) ggTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 2:1516069/1‑140 (MQ=255) ggTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 2:528297/1‑140 (MQ=255) ttttGAAAAAC‑CCTGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:725813/139‑1 (MQ=255) ttttGAAAAAC‑CCTGCACGGG‑T‑GCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTAAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:607956/139‑1 (MQ=255) tttaaaaaaac‑CCGGCAGGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:520553/135‑1 (MQ=37) tttGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTAc > 2:638053/1‑140 (MQ=255) tttGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTAc > 2:621120/1‑140 (MQ=255) a‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:528297/140‑1 (MQ=255) a‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:1708027/140‑1 (MQ=255) a‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa > 1:1229973/1‑140 (MQ=255) | GGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGG‑T‑GACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628511‑4628788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |