| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 599,535 | C→T | G274G (GGC→GGT) | cusA → | copper/silver export system RND permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,535 | 0 | C | T | 99.0% | 296.2 / ‑4.6 | 99 | G274G (GGC→GGT) | cusA | copper/silver export system RND permease |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (51/46); total (53/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGG > NC_000913/599400‑599671 | tatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTg < 1:1351553/140‑1 (MQ=255) tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGaa > 1:1164178/1‑140 (MQ=255) tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTAATGCCGaa > 1:354082/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:1472577/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:1861891/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:1964231/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:198323/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 1:741485/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 1:286813/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:593648/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 1:195386/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 2:1715484/1‑140 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAAc > 1:1515746/1‑140 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACt > 2:826673/1‑140 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTa > 2:919760/1‑140 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTa < 1:261378/140‑1 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTa > 1:1137187/1‑140 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTa > 1:1036340/1‑140 (MQ=255) cgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTaa > 2:1290245/1‑140 (MQ=255) cgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTaa > 1:1202683/1‑140 (MQ=255) gcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTaaa > 2:633039/1‑140 (MQ=255) ccAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAAc > 1:992294/1‑140 (MQ=255) cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGGCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATTCGCCGGGGTATTGCCGGACTAAACggcg > 2:616234/1‑140 (MQ=255) cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACggcg > 2:122801/1‑140 (MQ=255) cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCCGAACTAAACggcg > 2:124728/1‑140 (MQ=255) ggCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACggcga < 1:844549/140‑1 (MQ=255) cTATCTGCAAACGCTTGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACggcgaag < 2:27055/140‑1 (MQ=255) tCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACggcgaaggcg < 2:1617806/140‑1 (MQ=255) tCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACggcgaaggcg < 1:1170767/140‑1 (MQ=255) gCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGgcgaaggcgaag > 1:522004/1‑140 (MQ=255) aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggc > 2:901938/1‑140 (MQ=255) gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggcgg < 1:88588/140‑1 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGTCGAAGTggcggg < 2:1510199/140‑1 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggcggg < 1:876019/140‑1 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggcggg > 1:190826/1‑140 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggcggg > 2:429322/1‑140 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTggcgggcg < 2:1515746/140‑1 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGgcgggcgg < 1:1220393/140‑1 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCgggg < 1:695386/140‑1 (MQ=255) cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtgg < 2:1491827/140‑1 (MQ=255) cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtgg < 1:2007866/140‑1 (MQ=255) tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGggggggggggg > 1:1413596/1‑139 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGTGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCcgcg > 1:1493404/1‑140 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGcc > 2:1756686/1‑139 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCg > 1:1244223/1‑140 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGaggccgct > 2:1613197/1‑133 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTggg > 2:425911/1‑138 (MQ=255) tCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCTGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGa > 1:1830433/1‑140 (MQ=255) ttttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCggacc > 2:1409815/1‑136 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCTGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCaaaaa < 2:1830433/140‑1 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCaaaaa < 1:826673/140‑1 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCaaaaa < 2:1202683/140‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACg < 2:200626/140‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACg < 1:598686/140‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACg < 1:1861891/140‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACg < 1:1766309/140‑1 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGGTGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAGTCGGCAAAAAAGc > 1:2027125/1‑140 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGCGGGGGTCCTGCCGACCCGCCAAAACGc > 2:242510/1‑140 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCTTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGTCCCGCaaaaaacc > 1:916212/1‑137 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCga < 1:797753/140‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGAt < 1:1086265/140‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCCGCAAAAACGCCCGAGAAGGGAt > 1:535361/1‑140 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCATGCGATCCGGCAAAAACGCCCGAGAAGTGATcg < 2:1036340/140‑1 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcgc < 1:633039/140‑1 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGAATCCTGCGATCCGGCCAAAAAGCCCGAGAAgagagagc > 2:1589334/1‑136 (MQ=255) cccGTTTATCTGAGCGATGTTGCGAAGGCCCAGATGGGGCCGGAGATGCGACGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGAGGGCGGGGTGGTGATCCTGCGATCCGGCAAAACCGCCCGAGAAGTGATcgc < 2:146356/140‑1 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcgccg < 1:1962654/140‑1 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcgccg < 1:1101402/140‑1 (MQ=255) tttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTTGGGTCCGGCAAAAAAGCCCCAGGAGGGAGCgccgcc > 1:181849/1‑140 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCCTCGATCCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGCGAAGGa > 2:1712521/1‑140 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGAc < 2:1137187/140‑1 (MQ=255) cgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGGTCCCGCAAAAACGCCCGAGAAGTGATCGGCGCCCGGGAGGACa > 2:1275006/1‑140 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACaa < 2:1550859/140‑1 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCACCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACaa < 1:1867920/140‑1 (MQ=255) gAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGGTCGCCGCCGTGAAGGACAAACTGGaaa < 1:905069/140‑1 (MQ=255) gAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 2:317879/140‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 2:190826/140‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 1:1512888/140‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCCTCGAACCGGCCAAAAAGCCCGAGAAGGGATCGCCGCCGGGGAGGACAAAACGGAAAAGcc > 2:383494/1‑139 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGCGGAGGACAAACTGGAAACGcc > 2:843217/1‑139 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACTGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGCGGTCCGGCAAAAAAGGCCGGGAAGGGGTCGGCGGCGTGAAGGGCAAAATGGAAACCCTGa > 2:315323/1‑140 (MQ=255) cAGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTTCTGCGGTCCGGCAAAAAAGCCCGGGGAGTGATCGCCGCCGGGAAGGACAAAATGGGAACGCCGaa > 2:250708/1‑140 (MQ=255) aGATTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaa < 2:741485/140‑1 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAag < 2:354082/140‑1 (MQ=255) ttGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGTGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagt > 1:669767/1‑140 (MQ=255) tGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagta < 2:1244223/140‑1 (MQ=255) tGGCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagta < 1:1756686/140‑1 (MQ=255) gCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagtagt < 2:195386/140‑1 (MQ=255) gCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagtagt < 1:2042880/140‑1 (MQ=255) gCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGATCCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagtagt > 1:1198214/1‑140 (MQ=255) gCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGAGCACCTTCGCCCCGGCCAAAACGCCCCACAAGAGAGCAACGCCGCGGCGGATAAAGCGGAAACACGGaaaatcagc > 2:1218014/1‑135 (MQ=255) gCCCGGAGATGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGAGGGGGGGGGGTCCTGCGGTCCGGCAAAAAACCCCGAGAAGGGGGCGCCCCCGGGGAGGGCAAAACGGAAACGCTGGAAagtagt > 2:934447/1‑140 (MQ=255) aTGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGa < 2:504/140‑1 (MQ=255) aTGCGCCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGa < 1:879817/140‑1 (MQ=255) gcCGGGGTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGc < 1:813284/140‑1 (MQ=255) ggggTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 1:1517504/140‑1 (MQ=255) ggggTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTg < 2:1413596/140‑1 (MQ=255) gggTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTgg > 1:756911/1‑140 (MQ=255) gggTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTTCTGCGATCCGGCCAAAAAGCCCGAGAAAAGATCGCCGCCGTGAAGGACAAAATGGAAACGCTGAAAAGGAGTCTGCCGGGAGGCGTgg > 2:515133/1‑140 (MQ=255) gggTATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGCGATCCCGGAAAAACGCCCGAGAAGGGGACGCCGCCGGGGAGGGCAAAATGGAAAAGCCGAAAAGGAGGCTGCCCGGAGGCGTgg > 2:1544618/1‑140 (MQ=255) | TATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGG > NC_000913/599400‑599671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |