| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,216,447 | IS5 (–) +4 bp | coding (79‑82/267 nt) | ariR → | regulator of acid resistance, influenced by indole |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 275149 | NA (NA) | 126 (1.300) | 55/278 | 0.4 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1216447 = | 0 (0.000) | coding (79/267 nt) | ariR | regulator of acid resistance, influenced by indole | |||||
| * | ? | NC_000913 | = 1216450 | 0 (0.000) | 136 (1.400) | 70/278 | 0.1 | 100% | coding (82/267 nt) | ariR | regulator of acid resistance, influenced by indole |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 251 total aligned reads displayed.
TTCAATGGTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGAT > NC_000913/1216308‑1216586 | ttCAATGGTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGTTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGt < 1:851663/140‑1 (MQ=255)ttCAATGGTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGt > 2:693142/1‑140 (MQ=255) aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 2:951629‑M2/2‑1 (MQ=255) aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 2:875669‑M2/2‑1 (MQ=255) aaatctcttttctggtctgacggcgcttactgctgaattcaatgtcggcgcaggtaagttggtgactcatgatgaaccccgttctatgggtccagaagacaaacatgatctcctatcagggacttgttcgcacctttctt > 2:1577118‑M2/139‑140 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa > 2:978182‑M2/138‑140 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:1155131‑M2/3‑1 (MQ=255) aatctcttttctgtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTag < 1:762985‑M2/4‑1 (MQ=255) tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTag > 1:1297323‑M2/136‑139 (MQ=255) ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTagaa < 1:131159‑M2/6‑1 (MQ=255) ggTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGgga < 1:315976‑M1/140‑4 (MQ=255) ggTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGgga < 1:29316‑M1/140‑4 (MQ=255) tAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaag < 1:1041834‑M1/140‑6 (MQ=255) tAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaag < 1:674295‑M1/140‑6 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATcag < 2:1312853‑M2/16‑1 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATcag < 1:1440909‑M2/16‑1 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATcag < 1:1194987‑M2/16‑1 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATcag < 1:1233279‑M2/16‑1 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATcag < 1:1591234‑M2/16‑1 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAgtg > 1:1158978‑M2/120‑140 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagctgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAgtg > 1:1249389‑M2/120‑140 (MQ=255) ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGtt < 1:1279625‑M2/23‑1 (MQ=255) gAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcgg > 1:502614‑M1/1‑121 (MQ=255) aaTACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggg < 1:1599367‑M1/140‑21 (MQ=255) tACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcgggga > 1:653103‑M1/1‑118 (MQ=255) aCATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaa < 2:50096‑M1/140‑24 (MQ=255) aTTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaat > 2:1362430‑M1/1‑115 (MQ=255) aTTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGGAATTTGTTAGggaaggtgcgaataagcggggaaat > 1:536986‑M1/1‑115 (MQ=255) aaTTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttc > 2:1583112‑M1/1‑110 (MQ=255) attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCAc < 1:934368‑M2/38‑1 (MQ=255) attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCAc < 2:798837‑M2/38‑1 (MQ=255) cATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggc > 2:295723‑M1/1‑105 (MQ=255) taagtaagATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctg < 2:653103‑M1/140‑38 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAAt > 1:1499585‑M2/99‑140 (MQ=255) agtaagATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgac < 1:109922‑M1/140‑40 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTa < 1:89223‑M2/45‑1 (MQ=255) aagATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactca < 2:807472‑M1/140‑43 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAAt > 1:1062318‑M2/94‑140 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAAt > 2:2091‑M2/94‑140 (MQ=255) ggTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca > 1:220227‑M1/1‑89 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAgg > 2:578861‑M2/85‑140 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGa < 1:978182‑M2/59‑1 (MQ=255) aCCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc > 2:1239104‑M1/1‑85 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAAt > 2:233758‑M2/78‑140 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAAt > 1:1460670‑M2/78‑140 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGCTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAAt > 1:800812‑M2/78‑140 (MQ=255) gCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat > 2:342705‑M1/1‑80 (MQ=255) gATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 1:342705‑M1/140‑68 (MQ=255) tacAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat > 1:359827‑M1/1‑68 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAat > 2:1029321‑M2/63‑140 (MQ=255) ttCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:97046‑M1/140‑78 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAGTAATAAAAAtatt > 1:965165‑M2/60‑140 (MQ=255) cATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct > 2:1392509‑M1/1‑61 (MQ=255) cATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 2:1594498‑M1/140‑80 (MQ=255) cATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct < 1:1543900‑M1/140‑80 (MQ=255) aTAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 2:1559555‑M1/140‑81 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCtt < 1:57840‑M2/86‑1 (MQ=255) tGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt > 1:1219705‑M1/1‑56 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTc < 1:424179‑M2/91‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTc > 2:1292699‑M2/50‑140 (MQ=255) aaTAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 2:1129744‑M1/140‑88 (MQ=255) tAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg > 1:1377262‑M1/1‑51 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATa < 2:1338911‑M2/96‑1 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATa < 2:1460670‑M2/96‑1 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATaca < 1:1000532‑M2/98‑1 (MQ=255) gATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg > 2:1386472‑M1/1‑46 (MQ=255) aTAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga > 1:998975‑M1/1‑45 (MQ=255) tAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:1583112‑M1/140‑97 (MQ=255) cGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc < 2:116871‑M1/140‑102 (MQ=255) cGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc > 1:73078‑M1/1‑39 (MQ=255) atgatctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTgg < 2:503026‑M2/106‑1 (MQ=255) ttAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct > 1:992277‑M1/1‑37 (MQ=255) aGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat > 2:684995‑M1/1‑35 (MQ=255) aGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat > 1:395253‑M1/1‑35 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAaaca < 2:646195‑M2/111‑1 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAaacaa > 2:1048691‑M2/29‑140 (MQ=255) catatcagggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAaacaac > 1:716629‑M2/28‑140 (MQ=255) cTTTCGCAGTTCGGGTAATTTGTTAGggaaggtgcggataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac > 1:173239‑M1/1‑26 (MQ=255) ttCGCAGTTCGGGTAATTTGATAGggaaggtgctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatggttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt > 1:1606807‑M1/1‑24 (MQ=255) gggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGat < 2:1499585‑M2/120‑1 (MQ=255) gggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGat < 2:1628352‑M2/120‑1 (MQ=255) ggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGata > 2:614280‑M2/20‑140 (MQ=255) ggacttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGata < 2:1155538‑M2/121‑1 (MQ=255) cttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAaacaac < 2:772092‑M2/113‑1 (MQ=255) cttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAaacaac > 1:772092‑M2/17‑129 (MQ=255) cttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATtc > 1:132321‑M2/17‑140 (MQ=255) cttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATtc > 1:282920‑M2/17‑140 (MQ=255) cAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 2:1076659‑M1/1‑20 (MQ=255) cAGTTCGGGTAATTTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 1:469881‑M1/1‑20 (MQ=255) ttgttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATtct < 2:1249389‑M2/125‑1 (MQ=255) gttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCa > 2:117305‑M2/14‑140 (MQ=255) ttcgcaccttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTg > 1:1110540‑M2/13‑130 (MQ=255) accttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTg > 1:563933‑M2/8‑140 (MQ=255) cttccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGAt > 1:1252368‑M2/6‑140 (MQ=255) tGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctgtttagaccgtttcttcgccatttaaggcgt < 2:1632407‑M1/140‑135 (MQ=255) ccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGAtgtg > 2:433304‑M2/3‑140 (MQ=255) ccTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGAtgtg > 2:367646‑M2/3‑140 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt < 2:1085282‑M1/140‑136 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt < 2:731167‑M1/140‑136 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta > 1:1358404‑M1/1‑4 (MQ=255) | TTCAATGGTAAGAAAATAAACAGAATACATTAAAATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGAT > NC_000913/1216308‑1216586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |