Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,125	0	T	A	23.8%	153.8 / 17.2	64	intergenic (‑330/+60)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (43/5);  new base A (0/15);  total (43/21)
Fisher's exact test for biased strand distribution p-value = 1.27e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752986‑753264                                                                                                                                             |                                                                                                                                            gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCatat                                                                                                                                             <  2:724940/140‑1 (MQ=255) gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCatat                                                                                                                                             <  2:225506/140‑1 (MQ=255)      ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                        >  2:13380/1‑140 (MQ=255)        aaaTGCGACTCCCATGAATTTTTTAATTGAAATTATTGGGTTGCTAATATTTTGAGCTTTTTTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACAT‑TTTTTTGTTTTTAGGCATATAAAAATc                                                                                                                                      <  2:192950/140‑1 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  1:1058253/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  2:510172/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  1:857924/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  1:298057/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                  >  2:1092982/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                 >  1:1162233/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                 >  1:537642/1‑140 (MQ=255)                   ctaTGAAGTTTTTAATTGAAATTATGGGGTTGCTGATAATTTGAGCTGTTTTTTTCTTTTAAAATATCTATATAGGTCTGTTAATGGTTTTTTTTTTTACAT‑TTTTTTGTGTTTAGGCAAAAAAAAATCACCCCGCCata                                                                                                                           <  2:1588545/138‑1 (MQ=255)                          gTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAcgg                                                                                                                    >  1:144956/1‑140 (MQ=255)                           tttttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAAcggc                                                                                                                   <  1:895327/140‑1 (MQ=255)                                aaTTGAAAGTATTGGGTTGCTAATAATTTGAGTTTTTTTTTTTTTTTTAAATTTTTATATAGGTCTTTTAATGGTTTTTATTTTTAAAA‑TTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGtt                                                                                                              <  2:857924/140‑1 (MQ=255)                                   taaaaGTATTGGGTTGATGATAATTTGGGTTTTTCTATTTTTTTTAAATTTTTTTAGGGGTCTGTTAATGATTTTTATTTTTACAA‑TTTTTTGTTTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTaaa                                                                                                           <  2:1545988/138‑1 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAat                                                                                                         >  2:1139781/1‑140 (MQ=255)                                       aGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAatat                                                                                                       >  2:170161/1‑140 (MQ=255)                                            tGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACa                                                                                                  >  1:1334041/1‑140 (MQ=255)                                               gTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACt                                                                                               >  1:561401/1‑140 (MQ=255)                                                 tGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTa                                                                                             >  1:1280180/1‑140 (MQ=255)                                                  gCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAg                                                                                            >  1:1359232/1‑140 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                           >  1:1295910/1‑140 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                           >  1:392068/1‑140 (MQ=255)                                                      aTAATTTGATTTTCTCTTTTTTTTTAAATTTTATTTATCGTTCTTTTAATGTTTTTTA‑TTTAACAATTTTTTTGTTTTTGGCCATATAAAAATACCCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAAt                                                                                        <  2:960559/140‑1 (MQ=255)                                                            tGAGCTTTTTTATTTTTTTTAAATATTTATATAGGTTTTTTAATGATTTTTATTTTTAAAT‑TTTTTTGTGTTTAGGCATA‑AAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                                 <  2:1312947/140‑1 (MQ=255)                                                              agtttttCTTTTTTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTAAAA‑TTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAtt                                                                                <  1:1278284/135‑1 (MQ=255)                                                               ttttttCTTTTTTTTTTAAATATTTATATAGGTTTTTTAATGGTTTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                               <  2:392068/136‑1 (MQ=255)                                                               gttGTTTTTTTTTTTTTAAATATTTTTATAGGTTTGTTAATGGTTTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATGTTTACAACTTAGCAATCAACCATTa                                                                               <  2:146204/138‑1 (MQ=255)                                                                         tttttttAAATATTTATATAGGTTTTTTAATGGTTTTTTTTTTTACAT‑TTTTTTGTGTTTAGGAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGata                                                                     <  2:594072/138‑1 (MQ=255)                                                                          cTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                                    >  1:1486559/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGTCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  2:1544932/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTTGCAATCAACCATTAAAGCTTGATATCGc                                                                 >  2:1338617/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:103428/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:486921/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  2:1556049/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:349468/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:287749/1‑140 (MQ=255)                                                                                           taGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                   <  1:1374868/140‑1 (MQ=255)                                                                                           taGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                   >  1:1084366/1‑140 (MQ=255)                                                                                           aaGGTTTGTAAATGGATTTTTTTTTTACAA‑TTTTTTGTGTTTAGAAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                   <  1:31739/139‑1 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  2:868229/1‑140 (MQ=255)                                                                                               tCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                               >  1:662087/1‑140 (MQ=255)                                                                                                ttGTTAATGGTTTTTATTTTTAAAT‑TTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  2:662087/139‑1 (MQ=255)                                                                                                cTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTCAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTc                                              >  1:1426268/1‑140 (MQ=255)                                                                                                cTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              >  1:1055587/1‑140 (MQ=255)                                                                                                cTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              >  2:1391476/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:1033617/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:537963/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAAACAACCATTAAAGCTTGATATCGCTTTTAAAGACGTGttttttc                                             >  2:1122633/1‑138 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑‑TTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            >  2:1074759/1‑140 (MQ=255)                                                                                                  tttATTGGTTTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGCATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:496953/139‑1 (MQ=255)                                                                                                  tttAATGGATTATTTTTTTAAAT‑TTTTTTGTTTTTAGAAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:1495904/139‑1 (MQ=255)                                                                                                  gTTAATGGATTTTATTTTTACAA‑TTTTTTGTTTTTAGGCATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  1:170161/140‑1 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:1473403/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:227728/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:181807/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:1350339/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:1109941/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTTAAATATTTTCAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAATCGCGTTTTTCata                                           >  2:47097/1‑140 (MQ=255)                                                                                                          tttttttttttACAA‑TTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                    <  2:1334041/139‑1 (MQ=255)                                                                                                           ttttattttTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtat                                   >  2:8513/1‑140 (MQ=255)                                                                                                                        atttttttGTGTTTAGGCATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                       <  1:510172/138‑1 (MQ=255)                                                                                                                        atttttttGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                       <  2:287749/138‑1 (MQ=255)                                                                                                                               tttgtTTAGGCAAAAAAAAACCCACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:1426268/138‑1 (MQ=255)                                                                                                                               tgttTTTAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:1084366/140‑1 (MQ=255)                                                                                                                               tgttTTAAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:25834/140‑1 (MQ=255)                                                                                                                               tgtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:561401/140‑1 (MQ=255)                                                                                                                               tgtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  1:1556049/140‑1 (MQ=255)                                                                                                                                   tttAGTAATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGTGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATc            <  1:1122633/140‑1 (MQ=255)                                                                                                                                     tagaaataaAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt          <  2:103428/135‑1 (MQ=255)                                                                                                                                     tAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt          >  1:744513/1‑140 (MQ=255)                                                                                                                                       ggaataaAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCa        <  2:227728/137‑1 (MQ=255)                                                                                                                                       ggCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCa        <  2:1295910/140‑1 (MQ=255)                                                                                                                                          atatAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGGCGGGCAATCTTCATAc     <  1:8513/140‑1 (MQ=255)                                                                                                                                           tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc    >  2:1574016/1‑140 (MQ=255)                                                                                                                                           tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc    >  1:332579/1‑140 (MQ=255)                                                                                                                                           tataAAAATCAACCCGCCATATGAACGGCGGGGTTAAATATTTACCACTTAACAAACAAACATTCAAGCGTGATATCGCTTTTAAAGTCCCGGTTTTGATATCCTGTATACTGCCCACGCGGACGCGCAATCTTCATAcc    >  2:804765/1‑140 (MQ=255)                                                                                                                                             taAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt  >  2:684668/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                            GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752986‑753264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑