Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	445,558	0	A	C	29.2%	83.5 / 17.7	48	V370G (GTA→GGA)	yajR	putative major facilitator superfamily transport protein YajR
Reads supporting (aligned to +/- strand):  ref base A (19/15);  new base C (0/14);  total (19/29)
Fisher's exact test for biased strand distribution p-value = 2.05e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTG  >  NC_000913/445420‑445693                                                                                                                                           |                                                                                                                                         aGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATTGTACTGGCGACCGTCCGCCACACTGCGGCCAGCCTTTCGCCAGCGAGGAATaa                                                                                                                                         >  2:93255/1‑139 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTTTTTCCTGGTACTTGCGAACGTCAGCCACACTGCGGCCCGGAATGCCCCCGCGAGGAATAcccccc                                                                                                                                    >  2:480855/1‑139 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTTGGGGCTGTTTCCCACACTCCCGCCCGCCTTTCGCCCCCAAAAAAAAcccccc                                                                                                                                    >  2:665433/1‑139 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  2:484056/140‑1 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  2:493917/140‑1 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  1:826101/140‑1 (MQ=255)      aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  1:649809/140‑1 (MQ=255)       acagcTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTg                                                                                                                                   <  1:590631/136‑1 (MQ=255)        gCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGa                                                                                                                                  <  1:84067/140‑1 (MQ=255)              ttAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCa                                                                                                                           <  2:106196/140‑1 (MQ=255)                 aCGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAAc                                                                                                                        <  2:615972/140‑1 (MQ=255)                  cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACa                                                                                                                       <  2:1140888/140‑1 (MQ=255)                    ccTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTTTTTTATTGTACTGGCGACTGTCAGCCACACCGCGGCCCGCATTGCGCCAGCGAGAAATAACCCCTTACC‑CTCAAACATg                                                                                                                     >  2:934435/1‑140 (MQ=255)                      tCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGGACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCAGCGAGAAATAACCCCCGACC‑GTCAAACactgt                                                                                                                   >  2:590631/1‑136 (MQ=255)                          ttGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGTCTGTCAGCCACACCGCGGGCAGCAATGCGCCAGCGAGAAAAACCCCCTGACC‑GGCAAACACGcccgta                                                                                                               >  2:809218/1‑136 (MQ=255)                           tGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTaa                                                                                                              <  1:303201/140‑1 (MQ=255)                                cAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAg                                                                                                         <  1:1500696/140‑1 (MQ=255)                                  aTGTTCGCCGGGATTTCAATGCACAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAACATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAgcc                                                                                                       <  2:539918/140‑1 (MQ=255)                                             gATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAAc                                                                                            <  1:1414293/140‑1 (MQ=255)                                              aTTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAAcc                                                                                           <  1:1291543/140‑1 (MQ=255)                                                  cAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACGGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCa                                                                                       <  2:849722/140‑1 (MQ=255)                                                  cAATGCCAAACCTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTTTCAGCCACACCGCGGCCGGCTTGGCGCAGGGGAAAAACCCCCCGTGCCC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCa                                                                                       <  2:1426890/140‑1 (MQ=255)                                                     tGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATc                                                                                    <  1:461150/140‑1 (MQ=255)                                                       cgcAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgc                                                                                  >  1:1201118/1‑140 (MQ=255)                                                        gcAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGACTGTCAGCCACACCGCGGCCAGCATTGCGCCAGCGAGAAAAACCCCCCGACC‑GGCCAAAATGCCGTTAATTCAGCCGCCCCGCGAACCCCCCAAcgcc                                                                                 >  2:461150/1‑140 (MQ=255)                                                         cAAACTGCTGACATACGGCGGTTCTTTTATGGTACTTGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAAAACCCCCCGACC‑GTCAAACATGCCGTTAATTCCGCCCCCCCGCGAACCGCCCAAcgccc                                                                                >  2:839627/1‑139 (MQ=255)                                                         aaacctgctgAAATCCGGGGTTTCTTTCATGGTCCGGGCGACTGTCACCCCCCCTGCGGCCAGCATGGCGCCAGCGAGAAATCCCCCCTGACC‑GCAAACCATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgcca                                                                                <  2:1056409/136‑1 (MQ=255)                                                           accggctgACATCCGGGGTTTTTTTCATGTTCCTGGCGCCTTTCACCCACACGGCGGCCAGCTTTGCGCCAGCGAGAAATCCCCCTTGACC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgccacg                                                                              <  2:561869/136‑1 (MQ=255)                                                                 tgACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGa                                                                        >  1:994689/1‑140 (MQ=255)                                                                      tACGGCGGTTCTTTTATGGTACTGGCGACTGTCAGCCCCACTGCGGCCAGCATTGCGCCCGCGAGAAATACCCCCCGGCC‑GTCAAACATGCCCTTAATCCAGCCGCCCCGCGAACCGCCAATCGCCCCCCCCAAAAAcag                                                                   >  2:1407797/1‑138 (MQ=255)                                                                        gggcggTTCTTTCATGGTCCGGGCGCCTGACGCCCCCCGTGCGGCCAGCTTTGCCCCGGGAAAAAATCCCCCCTGCCC‑GTAAACCATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc                                                                 <  2:320492/139‑1 (MQ=255)                                                                        cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGGGAGAAATCCCCCCGGCCC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc                                                                 <  2:55186/140‑1 (MQ=255)                                                                                 tttCATGGTACTGGCGCCTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGt                                                        <  1:1501710/140‑1 (MQ=255)                                                                                    cagggTACGGGCGCCTGCCTCCCACACGGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTAACC‑GCCAAAAAGGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa                                                     <  2:121167/137‑1 (MQ=255)                                                                                      tGGTCCTGGCGACTGTCAGCCACCCTGCGGCCAGCATTGCGCCGGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAaca                                                   <  1:290823/140‑1 (MQ=255)                                                                                         tgcgggCGTCTGCCGGCCACTCGGGGGCCGGCAGTGCCCCAGCGAAAAAGACCCCTCGCCC‑ATCAACCAGGCCGTTAATCCAGCCGCCCGGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                <  2:1060969/136‑1 (MQ=255)                                                                                         tccTGGTGATTGTCGACCACGCGGCGGTCCGCATCGCGCGAGGGA‑AAAAACCCCCTGCCCGGTCACCCAGGCCGTTAGCCCACCCGCCCGGCGACCCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                <  2:1509834/138‑1 (MQ=255)                                                                                         tACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                <  1:480855/140‑1 (MQ=255)                                                                                              gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc                                           >  1:1423556/1‑140 (MQ=255)                                                                                              gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc                                           >  1:1499992/1‑140 (MQ=255)                                                                                              gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc                                           >  2:338045/1‑140 (MQ=255)                                                                                              gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc                                           >  2:1224483/1‑140 (MQ=255)                                                                                                  cTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:43231/140‑1 (MQ=255)                                                                                                  cTGTCACCCCCACTGGGGCCAGCATGGCCCCAGCGAAAAATCCCCCCTGCCC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:298379/140‑1 (MQ=255)                                                                                                   tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                >  1:1304248/1‑130 (MQ=255)                                                                                                   tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                <  2:1304248/130‑1 (MQ=255)                                                                                                   tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  2:814057/1‑140 (MQ=255)                                                                                                   tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:1507728/1‑140 (MQ=255)                                                                                                   tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:374566/1‑140 (MQ=255)                                                                                                      cAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCtt                                   >  1:808815/1‑140 (MQ=255)                                                                                                        gCCACACTGCGGCCAGCATTGCGCCAGCTAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTg                                 >  1:1065708/1‑140 (MQ=255)                                                                                                        gCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGACCCGCAAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTg                                 >  1:1119599/1‑140 (MQ=255)                                                                                                        gCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTg                                 >  2:183184/1‑140 (MQ=255)                                                                                                            cacTGCGGCCAGCATTGCGCCAGCGAGAAACCCCCCCTGCCC‑GTAAAACATCCCGTTATTCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAc                             <  2:315064/140‑1 (MQ=255)                                                                                                             acTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGGAAACACCCATCGCCGTACCTTTGTAAcc                            >  1:1019026/1‑140 (MQ=255)                                                                                                              cggCGGCCACCATTGCCCACGCGAAAAATCCCCCTGGCCC‑GTAAAACATGCCTTTAATCCAGCCGCCCAGCAAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACct                           <  2:224581/138‑1 (MQ=255)                                                                                                                   gCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg                      <  1:934435/140‑1 (MQ=255)                                                                                                                      aGCATTGCGCCCGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  2:783278/140‑1 (MQ=255)                                                                                                                      aGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  1:93255/140‑1 (MQ=255)                                                                                                                      aGCATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  1:814057/140‑1 (MQ=255)                                                                                                                      aGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   >  1:1145129/1‑140 (MQ=255)                                                                                                                        cATTGCGCCAGCGAGAAATCCCCCCTGACC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  2:531122/140‑1 (MQ=255)                                                                                                                        cATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 >  2:1223174/1‑140 (MQ=255)                                                                                                                        cATTGCGCCAGCGAAAAATCCCCCCTGCCC‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  1:1312545/140‑1 (MQ=255)                                                                                                                          ttGCGCCGGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  2:551099/140‑1 (MQ=255)                                                                                                                          ttGCGCCAGCGAGAAATCCCCCCTGCCC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  1:839627/140‑1 (MQ=255)                                                                                                                          tggccccAGCGAAAAATCCCCCCTGCCG‑TTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGCTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  2:994689/135‑1 (MQ=255)                                                                                                                           tGCGCCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCtt              <  2:1201118/140‑1 (MQ=255)                                                                                                                            gcgcCAGCGAGAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt             <  1:338045/140‑1 (MQ=255)                                                                                                                            gcgcCAGCGAAAAATCCCCCCGGCCC‑GCAAAACATGCCGTTAACCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt             <  1:772509/140‑1 (MQ=255)                                                                                                                             cgcCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTa            >  2:512489/1‑140 (MQ=255)                                                                                                                              gcCAGCGAAAAATCCCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTAc           <  1:1348200/140‑1 (MQ=255)                                                                                                                                 ggCGGGAAACCCCCTCTGACC‑AGCAAACATGCGGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGa        <  1:1413523/139‑1 (MQ=255)                                                                                                                                       aaaTCCCCCCTGCCG‑GTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTg  <  1:665433/140‑1 (MQ=255)                                                                                                                                       aaaTACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTg  >  2:229613/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                         AGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACC‑GTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTG  >  NC_000913/445420‑445693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑