BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,665,342	G→A	V10I (GTC→ATC)	clcB →	putative chloride:H(+) antiporter ClcB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,665,342	0	G	A	100.0%	399.5 / NA	113	V10I (GTC→ATC)	clcB	putative chloride:H(+) antiporter ClcB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (56/57); total (56/57)

Only 100 of 120 total aligned reads displayed.

AGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAGTCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCT  >  NC_000913/1665205‑1665478

aGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAatc                                                                                                                                        <  2:861508/140‑1 (MQ=255)

  cacgcacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAatcgt                                                                                                                                      <  1:2277949/140‑1 (MQ=255)

  cacgcacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAatcgt                                                                                                                                      <  1:1887847/140‑1 (MQ=255)

  cacgcacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAatcgt                                                                                                                                      <  2:939825/140‑1 (MQ=255)

    cgcacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAAtcgtcg                                                                                                                                    >  2:526277/1‑140 (MQ=255)

    cgcacTGCTTTTGCGGCTAGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAAtcgtcg                                                                                                                                    >  2:2238677/1‑140 (MQ=255)

     gcacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCgg                                                                                                                                   >  2:251261/1‑140 (MQ=255)

      cacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGt                                                                                                                                  >  2:1770879/1‑140 (MQ=255)

      cacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGt                                                                                                                                  >  2:97223/1‑140 (MQ=255)

      cacTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGt                                                                                                                                  >  2:37873/1‑140 (MQ=255)

       acTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTa                                                                                                                                 <  2:1053254/140‑1 (MQ=255)

                   gCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCt                                                                                                                     >  2:2054163/1‑140 (MQ=255)

                   gCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCt                                                                                                                     >  2:1012551/1‑140 (MQ=255)

                     tGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCttt                                                                                                                   >  2:1478497/1‑140 (MQ=255)

                     tGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCttt                                                                                                                   >  2:160803/1‑140 (MQ=255)

                       gCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTttgc                                                                                                                 >  1:663803/1‑140 (MQ=255)

                             tttGCCCAAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAGCAATCGTCGGTATTCTCGCGGCCTttgccgttgc                                                                                                           <  2:1370442/140‑1 (MQ=255)

                                gCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGTCTTTGCCGTTGCCgg                                                                                                        >  2:94138/1‑140 (MQ=255)

                                               cccGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAt                                                                                         <  1:645387/140‑1 (MQ=255)

                                                 cGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgc                                                                                       <  1:932495/140‑1 (MQ=255)

                                                 cGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgc                                                                                       <  1:251261/140‑1 (MQ=255)

                                                 cGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgc                                                                                       <  1:2238677/140‑1 (MQ=255)

                                                 cGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgc                                                                                       <  1:2156390/140‑1 (MQ=255)

                                                 cGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgc                                                                                       <  1:1281249/140‑1 (MQ=255)

                                                  gtgtTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCGCTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgct                                                                                      <  1:704696/140‑1 (MQ=255)

                                                   tgtTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgctg                                                                                     >  2:1169435/1‑140 (MQ=255)

                                                   tgtTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgctg                                                                                     >  2:734563/1‑140 (MQ=255)

                                                    gtTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgctgc                                                                                    <  2:105702/140‑1 (MQ=255)

                                                    gtTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGAtgctgc                                                                                    <  2:1443087/140‑1 (MQ=255)

                                                           tGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGa                                                                             <  1:2054163/140‑1 (MQ=255)

                                                           tGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGa                                                                             <  2:2225234/140‑1 (MQ=255)

                                                           tGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGa                                                                             <  2:1449680/140‑1 (MQ=255)

                                                           tGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGa                                                                             <  1:1169499/140‑1 (MQ=255)

                                                             cccATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGt                                                                           <  1:1169435/140‑1 (MQ=255)

                                                             cccATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGt                                                                           >  2:854956/1‑140 (MQ=255)

                                                             cccATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGt                                                                           >  1:531259/1‑140 (MQ=255)

                                                                 tttCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGgtt                                                                       <  1:1770879/140‑1 (MQ=255)

                                                                  ttCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGgttg                                                                      <  2:663803/140‑1 (MQ=255)

                                                                  ttCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGgttg                                                                      >  1:704841/1‑140 (MQ=255)

                                                                      gCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTcc                                                                  <  1:97223/140‑1 (MQ=255)

                                                                      gCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTcc                                                                  <  1:37873/140‑1 (MQ=255)

                                                                       cTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCt                                                                 >  1:1008120/1‑140 (MQ=255)

                                                                       cTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCt                                                                 >  2:2103915/1‑140 (MQ=255)

                                                                       cTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCt                                                                 >  1:1461581/1‑140 (MQ=255)

                                                                         cATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCa                                                               <  1:32295/140‑1 (MQ=255)

                                                                          aTGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCaa                                                              >  1:2274992/1‑140 (MQ=255)

                                                                            gCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCaata                                                            >  1:828865/1‑140 (MQ=255)

                                                                            gCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCaata                                                            >  2:1113587/1‑140 (MQ=255)

                                                                               tcatcTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATg                                                         >  1:2143285/1‑140 (MQ=255)

                                                                                catcTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGa                                                        <  1:974366/140‑1 (MQ=255)

                                                                                catcTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGa                                                        <  2:478856/140‑1 (MQ=255)

                                                                                   cTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTc                                                     <  1:160803/140‑1 (MQ=255)

                                                                                    tACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTcc                                                    >  1:2119409/1‑140 (MQ=255)

                                                                                     acacATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCg                                                   <  2:970674/140‑1 (MQ=255)

                                                                                     acacATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCg                                                   <  2:41522/140‑1 (MQ=255)

                                                                                      cacaTCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCgg                                                  >  1:1916017/1‑140 (MQ=255)

                                                                                       acaTCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGc                                                 <  1:854956/140‑1 (MQ=255)

                                                                                       acaTCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGc                                                 <  2:828865/140‑1 (MQ=255)

                                                                                       acaTCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGc                                                 >  1:455359/1‑140 (MQ=255)

                                                                                          tCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGt                                              <  2:2274992/140‑1 (MQ=255)

                                                                                          tCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGt                                              <  1:91397/140‑1 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCTTCAATAATGCCTCCGGAAGTc                                             >  2:1820610/1‑140 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGt                                              >  1:362230/1‑139 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGt                                              <  2:362230/139‑1 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTc                                             >  1:1096115/1‑140 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTc                                             >  1:1271628/1‑140 (MQ=255)

                                                                                           cTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTc                                             >  1:806627/1‑140 (MQ=255)

                                                                                            tATCCAGATCTGCGCATTATGAACCACCGTCTGCTGATCGCAACAATCGTCGGTATTCTCGCGGCCATTGCCGAGAACTGGTTACCTTATGCGATGCTTCTACTTGCTTGGTTGGTCCACAATAATGACTCCAGCaatgt                                            >  2:1985184/1‑136 (MQ=255)

                                                                                               ccGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGt                                         <  2:295749/140‑1 (MQ=255)

                                                                                                   aTCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAAt                                     >  2:851166/1‑140 (MQ=255)

                                                                                                   aTCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAAt                                     >  1:1708057/1‑140 (MQ=255)

                                                                                                     cTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGc                                   >  2:598334/1‑140 (MQ=255)

                                                                                                        cgcACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGc                                >  1:1985036/1‑140 (MQ=255)

                                                                                                        cgcACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGc                                >  1:236931/1‑140 (MQ=255)

                                                                                                        cgcACTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGc                                >  1:499922/1‑140 (MQ=255)

                                                                                                            cTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACa                            <  1:1658645/140‑1 (MQ=255)

                                                                                                            cTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACa                            <  2:2126663/140‑1 (MQ=255)

                                                                                                            cTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACa                            <  2:7056/140‑1 (MQ=255)

                                                                                                            cTATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACa                            <  1:2103915/140‑1 (MQ=255)

                                                                                                             tATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACaa                           >  2:975605/1‑140 (MQ=255)

                                                                                                             tATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACaa                           <  1:1113587/140‑1 (MQ=255)

                                                                                                             tATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACaa                           <  2:1916017/140‑1 (MQ=255)

                                                                                                             tATGTTCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACaa                           <  2:308788/140‑1 (MQ=255)

                                                                                                                  tCCACCGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCtt                      >  1:1475442/1‑140 (MQ=255)

                                                                                                                       cGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTcccc                 <  2:1008120/140‑1 (MQ=255)

                                                                                                                       cGTCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTcccc                 >  1:1441154/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  2:1002634/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  1:224966/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  2:1225574/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  2:222336/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  2:1650345/1‑140 (MQ=255)

                                                                                                                         tCTGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCt               >  1:1491315/1‑140 (MQ=255)

                                                                                                                           tGCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTgg             >  1:186442/1‑140 (MQ=255)

                                                                                                                            gCTTATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGc            <  2:1461581/140‑1 (MQ=255)

                                                                                                                              ttATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGa          <  2:806627/140‑1 (MQ=255)

                                                                                                                              ttATCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGa          <  2:1271628/140‑1 (MQ=255)

                                                                                                                                aTCGCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACg        <  2:186442/140‑1 (MQ=255)

                                                                                                                                   gCAACAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGtt     >  2:626379/1‑140 (MQ=255)

                                                                                                                                      aCAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCt  <  2:1985036/140‑1 (MQ=255)

                                                                                                                                      aCAATCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCt  <  2:236931/140‑1 (MQ=255)

AGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGCATCATCTACACATCTATCCGGATCTGCGCACTATGTTCCACCGTCTGCTTATCGCAACAGTCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCT  >  NC_000913/1665205‑1665478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`