Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,404,215 | 0 | T | G | 22.2% | 316.8 / 31.8 | 135 | G244G (GGT→GGG) | yhdH | acrylyl‑CoA reductase |
Reads supporting (aligned to +/- strand): ref base T (21/84); new base G (30/0); total (51/84) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.22e-16 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 150 total aligned reads displayed.
TGATGAGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATCATTCT > NC_000913/3404077‑3404354 | tgatgaGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCT‑GGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCCGCGGGGGGGCCCGTGGGCTGGCgggggg > 2:322335/1‑140 (MQ=255) gatgaGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGggtgg < 2:713688/140‑1 (MQ=255) tgaGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGtt > 2:1165255/1‑140 (MQ=255) aGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGgttt > 1:1826155/1‑140 (MQ=255) aGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGGGGCGGCCTGTGGTCTGGCGGGGGGgttt > 1:813120/1‑140 (MQ=255) tttGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTAc > 1:1555347/1‑140 (MQ=255) tttGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTAc > 1:402174/1‑140 (MQ=255) tttGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTat > 2:799425/1‑139 (MQ=255) ttGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTAct < 2:907530/140‑1 (MQ=255) ttGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTAct < 1:624617/140‑1 (MQ=255) tGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGGGGCGGCCTGTGGTCTGGCGGGGGGGTTTtct‑c > 2:798963/1‑140 (MQ=255) tGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCCGCGTGGCGGCCTGTGGGCTGGCGGGGGGGTTTtct‑c > 2:484498/1‑140 (MQ=255) ggcGAAACCCGTCCTCTGGAAAAACAAGTCCGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTAct‑ct < 2:938435/138‑1 (MQ=255) gCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTAct‑ct < 2:2082881/140‑1 (MQ=255) ccGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑g < 2:402174/140‑1 (MQ=255) gAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑Gcc < 1:804600/140‑1 (MQ=255) ccGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCa < 1:1651709/140‑1 (MQ=255) ccGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCa < 1:1690048/140‑1 (MQ=255) cGTCCTCTGGAAAAACAAGTCTGGCCTGGGGCAACTGACACCGTTGGCGACAAAGTGATCGCAAAAGTACTGACGCACATGAATTACGGAGGATGCGGGGGGGCCCCTGGTCTGGCGGATGGGTTTTTT‑CG‑GCCcaccac > 2:2176433/1‑140 (MQ=255) ctctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTc < 2:1555347/140‑1 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCAt < 2:2040152/140‑1 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCAt < 2:1743522/140‑1 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCAt < 2:42093/140‑1 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCAt > 1:833590/1‑140 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCAt < 1:1112590/140‑1 (MQ=255) ctGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑TCCCACCCCGGGCAt > 2:616390/1‑140 (MQ=255) tGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑TCCCACCCCCGGCATg > 2:1005684/1‑140 (MQ=255) gacaggggctgggGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTc < 1:1854241/135‑1 (MQ=255) aGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTAt < 2:1052847/138‑1 (MQ=255) aGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTc < 2:753678/140‑1 (MQ=255) aGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGGTTTACT‑CT‑GCCAACCACGGTCATGCCATTTAt > 1:1052847/1‑138 (MQ=255) aGTCTGGGCT‑GGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCt < 1:322335/140‑1 (MQ=255) tgggctgggGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCg < 2:1801005/140‑1 (MQ=255) ggctgggGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTa < 1:990348/140‑1 (MQ=255) gggCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTc > 1:1953431/1‑140 (MQ=255) ggCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTcc > 1:1225072/1‑140 (MQ=255) ggCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTcc > 1:1380319/1‑140 (MQ=255) aTTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CTCCCCAACCCCGG‑CATGCCCATTTTTTTGCGGAATGTTCGttt > 2:1547281/1‑140 (MQ=255) tGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGc < 2:1258940/140‑1 (MQ=255) tGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGc < 2:1043387/140‑1 (MQ=255) tGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGc < 2:624598/140‑1 (MQ=255) tGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGc < 1:70670/140‑1 (MQ=255) tGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACAGCGGCTGGGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGc < 1:2176433/140‑1 (MQ=255) acacCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCaa < 2:2204919/140‑1 (MQ=255) acacCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCaa < 1:1165255/140‑1 (MQ=255) cacCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑TCCAACCACGGGCATGCCCTTTTTTTTGCGGAATGTCCCGTTTCAAg > 2:1390473/1‑140 (MQ=255) cacCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGGGGCGGCCCGTGGTCTGGCGGGGGGGTTTTCTCCT‑GCC‑ACCACGGGCAATGCATTTATTTTGCGGAATGTCCGTTTGCAAg > 2:148747/1‑140 (MQ=255) gTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGt < 1:616390/140‑1 (MQ=255) gTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGt < 1:1005684/140‑1 (MQ=255) tGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTgg > 1:258575/1‑140 (MQ=255) tGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCCGTGGTCTGGCGGGGGGGTTTTCT‑CT‑GCCCACCACGGGGATGCCATTTATTCTGCGTGATGTCCGTTTGCAAGgggggg > 2:742935/1‑140 (MQ=255) ggCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTTCT‑CT‑GCCAACCACGGTCATGCCATTTATTTTTCGTAATGTCCGGTTTCAAGGGGTGGa > 1:1016949/1‑140 (MQ=255) gCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGAt < 2:1826155/140‑1 (MQ=255) gCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑GCCAACCACGGGCATGCCATTTTTTTTGCGTAATGTCCCGTTGTAAGgggggggt > 2:505683/1‑138 (MQ=255) cGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGAtt < 1:799425/140‑1 (MQ=255) aaGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTa < 2:66705/140‑1 (MQ=255) gTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAAt < 1:317031/140‑1 (MQ=255) gTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAAt < 2:1315811/140‑1 (MQ=255) gCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGa > 1:1705106/1‑140 (MQ=255) ggCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGc < 1:2187075/140‑1 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGcc < 2:1716653/140‑1 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTACT‑CT‑TCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGcc > 1:1510480/1‑140 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTACT‑CT‑GCCAACCACGGGCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGcc > 1:2012959/1‑140 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑GCCCAACACGGGCCTGCCATTTATTCTGCGTAATGTCCGTTTGCCAGGGGGGGGTTCAGTAATGACGcc > 2:2098978/1‑140 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑GCCAAACACGGTCATGCCCTTTTTTTTGCGTAATGTCCGTTTGCAAGGGGGGGGTTCAGGAATGACGcc > 2:317031/1‑140 (MQ=255) gCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTACT‑CG‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGGGGATTCAGTAATGACGcc > 1:2120643/1‑140 (MQ=255) cAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGGTTTACT‑CT‑GCCAACCACGGGCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGGGGATTCAGTAATGACGccc > 1:898120/1‑139 (MQ=255) aGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCCGGCGGGGGGTTTTTAT‑CC‑CCCAACCACGGGCCTACCATTTATTTTTCGCCATTTCCCTTTGCAAGGGGTGGGTTCAGTAAAGAACccacccc > 2:1487426/1‑138 (MQ=255) gtgtTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGa < 2:1983721/140‑1 (MQ=255) cTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAAcg < 1:2081365/140‑1 (MQ=255) tGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAAcgc < 1:2017217/140‑1 (MQ=255) ggCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAAcgcc < 1:269233/140‑1 (MQ=255) gcgcAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTAT‑CT‑TCCAAACACGGGCATGCCCTTTTTTTTGCGTAAAGTCCGGTTGCAAGGGGGGGATTTCGGAATGACGCCCCCAGAAcgccc > 2:387362/1‑139 (MQ=255) cAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTCCT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCgcgc < 1:1162315/140‑1 (MQ=255) cAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCATCCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCgcgc < 2:1526134/140‑1 (MQ=255) cAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCgcgc < 1:138723/140‑1 (MQ=255) cAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCgcgc < 1:1390473/140‑1 (MQ=255) aaTGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGcac < 1:798963/140‑1 (MQ=255) aaTGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGGTTTACT‑CT‑GCCAACCCCGGGCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGGGGATTCAGTAATGACGCCACCAGAACGCCGCGcac > 1:117345/1‑140 (MQ=255) cggcggCTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑GCCAACCACGGTCATGCCATTTTTTTTTCGTAATGTCCGTTTGCGAGGGGTGGGTTTAGGAAAGACGCCACCAGTACGCCGCGCCCAAGCCTGGc > 2:764058/1‑140 (MQ=255) gcTGCGTGGCGGCCTGTGGTCTGGCGGGGGGGTTTTCT‑CT‑TCCCACCCCGGTCATGCCATTTATTCTGCGTAATGTCCGTTTTCAAGGGGGGGGTTTAGTAATGACGCCCCCAGAACGCCGCGCACAAACCTGGGAGCGa > 2:1641353/1‑140 (MQ=255) cGTGGCGGCCTGTGGTCTGGCGGGTGGGTTTACT‑CT‑GCCAACCACGGGCATGCCATTTATTCTGCGGAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTgg > 2:921611/1‑140 (MQ=255) cGTGGCGGCCTGTGGTCTGGCGGGGGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGGGGATTCAGTAAAGACGCCCCCAGAACGCCGCGCACAAACCTGGCAGCGACTgg > 2:2210384/1‑140 (MQ=255) gTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGt < 1:1061806/140‑1 (MQ=255) gTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGt > 1:1283622/1‑140 (MQ=255) gTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGt < 1:484498/140‑1 (MQ=255) tGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACCGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTc < 1:1547281/140‑1 (MQ=255) ggcggcCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCg < 2:1221596/140‑1 (MQ=255) ggcggcCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCg < 2:902724/140‑1 (MQ=255) gcggcCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGc < 1:1487426/140‑1 (MQ=255) tGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGAtt < 2:506715/132‑1 (MQ=255) tGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGAtt > 1:506715/1‑132 (MQ=255) tGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGaa < 1:494567/140‑1 (MQ=255) ggCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCTATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAAt < 1:464163/140‑1 (MQ=255) ggCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAAt > 1:1984476/1‑140 (MQ=255) ggCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAAt < 1:505683/140‑1 (MQ=255) gCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATc < 2:1236146/140‑1 (MQ=255) gCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATc < 1:742935/140‑1 (MQ=255) gtggtTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATCATTc < 2:668014/140‑1 (MQ=255) tggaTTTAAT‑CT‑CCCAAACACGGTCATTCCCTTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGCACGCCGCGCACAAACGCGGCAGCGACTGGTCGCCGACTTACCGGAACCATTCt > 2:2167717/1‑140 (MQ=255) | TGATGAGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACT‑CT‑GCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATCATTCT > NC_000913/3404077‑3404354 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |