New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2739278113 (0.940)3 (0.030) 3/270 11.3 3.0% coding (792/1122 nt) tyrA fused chorismate mutase/prephenate dehydrogenase
?NC_000913 2739720 = 85 (0.730)coding (350/1122 nt) tyrA fused chorismate mutase/prephenate dehydrogenase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

GACGACATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAC  >  NC_000913/2739141‑2739417
                                                                                                                                         |                                                                                                                                           
gacgacATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGccc                                                                                                                                           >  2:679275/1‑140 (MQ=255)
 acgacATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCg                                                                                                                                          >  1:739821/1‑140 (MQ=255)
 acgacATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCg                                                                                                                                          <  2:1328086/140‑1 (MQ=255)
 acgacATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAACCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCg                                                                                                                                          <  2:1084215/140‑1 (MQ=255)
         atgatgTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCaaa                                                                                                                                  <  1:1911798/140‑1 (MQ=255)
           gatgTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAg                                                                                                                                <  1:1836469/140‑1 (MQ=255)
             tgTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTa                                                                                                                              >  2:960585/1‑140 (MQ=255)
             tgTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTa                                                                                                                              >  1:637455/1‑140 (MQ=255)
             tgTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTa                                                                                                                              >  1:1731848/1‑140 (MQ=255)
              gTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAg                                                                                                                             <  1:962684/140‑1 (MQ=255)
               tCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGc                                                                                                                            >  2:853349/1‑140 (MQ=255)
               tCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGc                                                                                                                            >  2:511095/1‑140 (MQ=255)
               tCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGc                                                                                                                            >  2:696620/1‑140 (MQ=255)
                cGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCa                                                                                                                           >  2:501209/1‑140 (MQ=255)
                cGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCa                                                                                                                           >  1:869605/1‑140 (MQ=255)
                 ggCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCaa                                                                                                                          >  1:918042/1‑140 (MQ=255)
                  gCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCaaa                                                                                                                         >  1:597275/1‑140 (MQ=255)
                  gCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCaaa                                                                                                                         >  1:1314750/1‑140 (MQ=255)
                  gCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCaaa                                                                                                                         >  2:1709558/1‑140 (MQ=255)
                   cATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAg                                                                                                                        >  1:673486/1‑140 (MQ=255)
                        aGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcg                                                                                                                   <  2:733025/140‑1 (MQ=255)
                        aGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcg                                                                                                                   <  2:1698706/140‑1 (MQ=255)
                         gCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcgc                                                                                                                  <  1:577493/140‑1 (MQ=255)
                         gCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcgc                                                                                                                  <  2:1431566/140‑1 (MQ=255)
                         gCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcgc                                                                                                                  <  2:690848/140‑1 (MQ=255)
                         gCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcgc                                                                                                                  <  2:918042/140‑1 (MQ=255)
                         gCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCACCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGgcgc                                                                                                                  <  2:1258696/140‑1 (MQ=255)
                          cTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCa                                                                                                                 <  2:1773744/140‑1 (MQ=255)
                             cGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTg                                                                                                              >  2:496440/1‑140 (MQ=255)
                                  ccTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGa                                                                                                         >  2:518482/1‑140 (MQ=255)
                                   cTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGGGCCTGaa                                                                                                        >  2:982633/1‑140 (MQ=255)
                                    tGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAAt                                                                                                       <  1:736074/140‑1 (MQ=255)
                                     gAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATa                                                                                                      >  2:1483360/1‑140 (MQ=255)
                                      aGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaa                                                                                                     <  2:1731848/140‑1 (MQ=255)
                                      aGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaa                                                                                                     <  1:786692/140‑1 (MQ=255)
                                      aGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaa                                                                                                     <  1:1620619/140‑1 (MQ=255)
                                      aGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaa                                                                                                     <  2:1163956/140‑1 (MQ=255)
                                       gCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACCTTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaaa                                                                                                    >  2:1059935/1‑140 (MQ=255)
                                       gCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaaa                                                                                                    >  1:1899583/1‑140 (MQ=255)
                                       gCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATaaa                                                                                                    >  1:1863422/1‑140 (MQ=255)
                                         aaaCAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACg                                                                                                  <  1:446218/140‑1 (MQ=255)
                                          aaCAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGc                                                                                                 <  1:1039592/140‑1 (MQ=255)
                                           aCAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGcc                                                                                                <  2:1976446/140‑1 (MQ=255)
                                           aCAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGcc                                                                                                >  2:413121/1‑140 (MQ=255)
                                           aCAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGcc                                                                                                <  1:1247913/140‑1 (MQ=255)
                                            cAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCa                                                                                               <  1:387468/140‑1 (MQ=255)
                                               tCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCatat                                                                                            <  2:673486/140‑1 (MQ=255)
                                                cGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATAtt                                                                                           >  1:541336/1‑140 (MQ=255)
                                                  cccGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCt                                                                                         >  1:1437254/1‑140 (MQ=255)
                                                    cGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGa                                                                                       <  1:491656/140‑1 (MQ=255)
                                                         aTCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTg                                                                                  >  1:576266/1‑140 (MQ=255)
                                                               aGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGAc                                                                            <  1:1163736/140‑1 (MQ=255)
                                                               aGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGAc                                                                            <  1:1623342/140‑1 (MQ=255)
                                                               aGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGAc                                                                            <  1:779780/140‑1 (MQ=255)
                                                               aGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGAc                                                                            <  1:1483360/140‑1 (MQ=255)
                                                               aGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGAc                                                                            <  1:1269652/140‑1 (MQ=255)
                                                                 cTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACgg                                                                          <  1:960096/140‑1 (MQ=255)
                                                                 cTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACgg                                                                          >  1:36805/1‑140 (MQ=255)
                                                                 cTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACgg                                                                          <  1:1557489/140‑1 (MQ=255)
                                                                    aaGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGgcgc                                                                       <  1:750869/140‑1 (MQ=255)
                                                                        cGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTTTGATCGTGCTCGACGGCGCTAAt                                                                   <  1:1493265/140‑1 (MQ=255)
                                                                        cGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAAt                                                                   >  2:1305421/1‑140 (MQ=255)
                                                                         ggTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATa                                                                  <  2:1853178/140‑1 (MQ=255)
                                                                           tAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACg                                                                >  1:1224963/1‑140 (MQ=255)
                                                                            aaaTCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGa                                                               <  1:679275/140‑1 (MQ=255)
                                                                                cGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCa                                                           >  2:1952301/1‑140 (MQ=255)
                                                                                 ggCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAg                                                          >  2:1638107/1‑140 (MQ=255)
                                                                                     aaGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGa                                                      >  2:1467139/1‑140 (MQ=255)
                                                                                      agagagCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAg                                                     <  1:23499/140‑1 (MQ=255)
                                                                                      agagagCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAg                                                     <  2:1853039/140‑1 (MQ=255)
                                                                                          agCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGcc                                                 <  1:121596/140‑1 (MQ=255)
                                                                                           gcgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGccc                                                <  2:1899583/140‑1 (MQ=255)
                                                                                           gcgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGccc                                                <  1:991374/140‑1 (MQ=255)
                                                                                           gcgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGccc                                                <  1:1617734/140‑1 (MQ=255)
                                                                                           gcgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGccc                                                <  2:576266/140‑1 (MQ=255)
                                                                                            cgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGcccc                                               <  2:1863422/140‑1 (MQ=255)
                                                                                            cgcCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGcccc                                               >  2:1459499/1‑140 (MQ=255)
                                                                                               cAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGAAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGACGGCCCCAGa                                            >  2:446281/1‑140 (MQ=255)
                                                                                                  aaGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCt                                         <  2:1912096/140‑1 (MQ=255)
                                                                                                           aaGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCt                                <  1:518482/140‑1 (MQ=255)
                                                                                                           aaGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCt                                <  1:2020503/140‑1 (MQ=255)
                                                                                                            aGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTc                               >  2:1726944/1‑140 (MQ=255)
                                                                                                                gAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGa                           <  2:1703228/140‑1 (MQ=255)
                                                                                                                  aCATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGTTCCAGaag                         >  2:1468488/1‑139 (MQ=255)
                                                                                                                       ttcttcTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCAtt                    >  2:1789419/1‑140 (MQ=255)
                                                                                                                       ttcttcTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCAtt                    >  2:271216/1‑140 (MQ=255)
                                                                                                                          ttctGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGt                 <  1:447158/140‑1 (MQ=255)
                                                                                                                           tctGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTa                <  2:869605/140‑1 (MQ=255)
                                                                                                                              gCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGc             <  2:36805/140‑1 (MQ=255)
                                                                                                                                cAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCCCCAGAAACCATTGGTATGCtt           <  1:1262722/140‑1 (MQ=255)
                                                                                                                                 aGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTc          <  2:268487/140‑1 (MQ=255)
                                                                                                                                 aGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTc          <  1:451230/140‑1 (MQ=255)
                                                                                                                                 aGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTc          <  2:931290/140‑1 (MQ=255)
                                                                                                                                  ggTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTcc         >  1:739815/1‑140 (MQ=255)
                                                                                                                                    tGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCgg       >  1:299455/1‑140 (MQ=255)
                                                                                                                                       aGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGttt    <  1:501209/140‑1 (MQ=255)
                                                                                                                                         cccGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAc  >  1:152382/1‑140 (MQ=255)
                                                                                                                                         cccGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAc  >  2:219971/1‑140 (MQ=255)
                                                                                                                                         cccGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAc  <  2:872131/140‑1 (MQ=255)
                                                                                                                                         cccGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAc  <  1:988554/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
GACGACATAATGATGTCGGCATAAAGCTGCGGATCCTGAGCAAACAGTCGCCCGACCATCGCCAGCTCAAGGCGGTAAATCGGCGAAGAGAGCGCCAGAAGTTGCTCAAGCTGAACATTTTCTTCTGCCAGGTGCAGCCCGTAAGCAAAAGTAGCAAAGTGGCGCAGTGCCTGAATAAACGCCATATTCTGATCGTGCTCGACGGCGCTAATACGATGCAGCCGAGCGCCCCAGACCTGAATTTGCTCCAGAAACCATTGGTATGCTTCCGGTTTAC  >  NC_000913/2739141‑2739417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.