Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,668,767	G→C	P276A (CCG→GCG)	ynfL ←	putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,668,767	0	G	C	100.0%	334.3 / NA	88	P276A (CCG→GCG)	ynfL	putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (40/48);  total (40/48)

GTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATG  >  NC_000913/1668631‑1668897                                                                                                                                         |                                                                                                                                   gtcgtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCa                                                                                                                                 >  2:1060388/1‑140 (MQ=255) gtcgtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCa                                                                                                                                 >  1:1397228/1‑140 (MQ=255) gtcgtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATCTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCa                                                                                                                                 >  1:1170904/1‑140 (MQ=255) gtcgtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGC‑TTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAg                                                                                                                                >  2:1067557/1‑140 (MQ=255)  tcgtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAg                                                                                                                                <  2:1247575/140‑1 (MQ=255)    gtcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGac                                                                                                                              >  1:767248/1‑140 (MQ=255)     tcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGacc                                                                                                                             >  2:1447674/1‑140 (MQ=255)     tcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGacc                                                                                                                             <  1:288989/140‑1 (MQ=255)     tcAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGacc                                                                                                                             <  2:450311/140‑1 (MQ=255)      cAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGacca                                                                                                                            >  1:274808/1‑140 (MQ=255)        aaTTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGaccaac                                                                                                                          <  2:1746065/140‑1 (MQ=255)           ttttACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACcac                                                                                                                       <  1:573245/140‑1 (MQ=255)           ttttACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACcac                                                                                                                       <  2:1474125/140‑1 (MQ=255)            tttACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACcaca                                                                                                                      >  2:1285346/1‑140 (MQ=255)              tACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACAtt                                                                                                                    >  1:750395/1‑140 (MQ=255)                  tAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAg                                                                                                                <  1:1005694/140‑1 (MQ=255)                   aGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGa                                                                                                               <  1:1285346/140‑1 (MQ=255)                          tgATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCa                                                                                                        <  2:274808/140‑1 (MQ=255)                          tgATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCa                                                                                                        <  1:296786/140‑1 (MQ=255)                            aTTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATc                                                                                                      <  1:1332216/140‑1 (MQ=255)                               aaCAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGGCTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCctc                                                                                                   <  1:858290/140‑1 (MQ=255)                                   gCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCa                                                                                               >  2:156885/1‑140 (MQ=255)                                   gCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCa                                                                                               <  1:790807/140‑1 (MQ=255)                                    cacaTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAg                                                                                              >  2:1583437/1‑140 (MQ=255)                                    cacaTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAg                                                                                              >  2:1919293/1‑140 (MQ=255)                                    cacaTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAg                                                                                              >  2:661197/1‑140 (MQ=255)                                    cacaTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAg                                                                                              >  1:1114188/1‑140 (MQ=255)                                    cacaTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAg                                                                                              >  2:833449/1‑140 (MQ=255)                                      caTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCa                                                                                            >  1:452099/1‑140 (MQ=255)                                       aTTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCaa                                                                                           >  2:798511/1‑140 (MQ=255)                                               ggCTTTTTCGCTGAAATTTCCCTCCCCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAcc                                                                                   <  1:90334/140‑1 (MQ=255)                                                 cTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCa                                                                                 <  2:1151351/140‑1 (MQ=255)                                                   ttttCGCTGAAATTTCCCTCACATGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAgc                                                                               >  2:1132858/1‑140 (MQ=255)                                                     ttCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAccc                                                                                  <  2:651247/135‑1 (MQ=255)                                                     ttCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCAccc                                                                                  >  1:651247/1‑135 (MQ=255)                                                      tCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCa                                                                            <  1:1558973/140‑1 (MQ=255)                                                      tCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCa                                                                            <  1:156885/140‑1 (MQ=255)                                                      tCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGAAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCa                                                                            <  2:1174483/140‑1 (MQ=255)                                                             aaTTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGtt                                                                     <  2:443587/140‑1 (MQ=255)                                                             aaTTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGtt                                                                     <  2:943734/140‑1 (MQ=255)                                                               tttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGa                                                                   >  2:520194/1‑140 (MQ=255)                                                                ttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAg                                                                  <  2:452099/140‑1 (MQ=255)                                                                ttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAg                                                                  <  1:1067557/140‑1 (MQ=255)                                                                ttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAg                                                                  <  1:833449/140‑1 (MQ=255)                                                                ttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAg                                                                  <  1:1228629/140‑1 (MQ=255)                                                                ttCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAg                                                                  <  1:1919293/140‑1 (MQ=255)                                                                     tCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGaa                                                             <  2:1077899/140‑1 (MQ=255)                                                                      cACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAac                                                            >  1:1108468/1‑140 (MQ=255)                                                                       aCCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAaca                                                           <  2:20569/140‑1 (MQ=255)                                                                          tGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACTAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGt                                                        <  1:1713059/140‑1 (MQ=255)                                                                            agagCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGttt                                                      >  2:281493/1‑140 (MQ=255)                                                                               gCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTaaa                                                   <  1:994289/140‑1 (MQ=255)                                                                                 aTTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATg                                                 >  1:1690713/1‑140 (MQ=255)                                                                                 aTTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATg                                                 >  2:386009/1‑140 (MQ=255)                                                                                  ttCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGa                                                >  2:771715/1‑140 (MQ=255)                                                                                   tCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGAc                                               >  2:303592/1‑140 (MQ=255)                                                                                   tCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGAc                                               >  1:11905/1‑140 (MQ=255)                                                                                         gATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGc                                         <  1:468829/140‑1 (MQ=255)                                                                                             aaTACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCaaaa                                     <  1:1132858/140‑1 (MQ=255)                                                                                               tACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAAtt                                   >  2:1375660/1‑140 (MQ=255)                                                                                                 cGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGa                                 <  1:1671581/140‑1 (MQ=255)                                                                                                 cGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGa                                 >  2:1273966/1‑140 (MQ=255)                                                                                                  gAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGaa                                <  1:171059/140‑1 (MQ=255)                                                                                                   aaaGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGaaa                               >  1:316829/1‑140 (MQ=255)                                                                                                    aaGTTACGCGCAGCCGGACTTTGTTCTTGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAac                              >  1:705854/1‑140 (MQ=255)                                                                                                    aaGTTACGCGCAGCCGGACTTTGTTCATGGTGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAac                              >  1:1440830/1‑140 (MQ=255)                                                                                                    aaGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAac                              >  2:797428/1‑140 (MQ=255)                                                                                                    aaGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAac                              >  2:381215/1‑140 (MQ=255)                                                                                                       ttACGCGCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACAcc                           <  2:499312/140‑1 (MQ=255)                                                                                                          cgcgCAGCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAg                        >  2:594592/1‑140 (MQ=255)                                                                                                                gCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACcggc                  <  1:327306/140‑1 (MQ=255)                                                                                                                gCCGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACcggc                  >  2:1899806/1‑140 (MQ=255)                                                                                                                 ccGGACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACcggcg                 >  2:1308534/1‑140 (MQ=255)                                                                                                                   ggACTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGa               <  2:776356/140‑1 (MQ=255)                                                                                                                      cTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAAc            <  1:1182404/140‑1 (MQ=255)                                                                                                                      cTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAAc            <  1:1308534/140‑1 (MQ=255)                                                                                                                      cTTTGTTCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAAc            <  2:1690713/140‑1 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       >  2:665758/1‑140 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       >  2:1073520/1‑140 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       <  2:11651/140‑1 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       <  1:771715/140‑1 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       >  2:622084/1‑140 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       <  2:253182/140‑1 (MQ=255)                                                                                                                           ttCATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGAc       <  1:1375660/140‑1 (MQ=255)                                                                                                                             cATGATGTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGTCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCg     <  1:198090/140‑1 (MQ=255)                                                                                                                                gatgTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCgatg  <  2:705854/140‑1 (MQ=255)                                                                                                                                gatgTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCgatg  <  2:767248/140‑1 (MQ=255)                                                                                                                                gatgTTTCGCCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCgatg  <  1:381215/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                   GTCGTCAAATTTTTACTTAGGCATGTGATTAACAGCACATTTTTCGGGCTTTTTCGCTGAAATTTCCCTCACCTGAGAGCATTCAGCAGATGAATACGAAAGTTACGCGCAGCCGGACTTTGTTCATGATGTTTCGGCCAGACCAACCACATTTCAGAAACCGCATCCTCTTCAGCAATCGGCACCCAGCGCATTTCGTTGAGCTGAACACGTTTAAATGACGCAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATG  >  NC_000913/1668631‑1668897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑