BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4353774 =	120 (1.360)	4 (0.050)	4/260	7.3	3.6%	coding (944/1518 nt)	lysU	lysine‑‑tRNA ligase/Ap4A synthetase/Ap3A synthetase
*	?	NC_000913	4353912 =	102 (1.240)	4 (0.050)	4/260	7.3	3.6%	coding (806/1518 nt)	lysU	lysine‑‑tRNA ligase/Ap4A synthetase/Ap3A synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 120 total aligned reads displayed.

CGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAA  >  NC_000913/4353635‑4353912

cGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCt                                                                                                                                            <  1:324174/140‑1 (MQ=255)

  tAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCg                                                                                                                                          >  1:962727/1‑140 (MQ=255)

  tAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCg                                                                                                                                          >  2:22473/1‑140 (MQ=255)

      aCCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCAt                                                                                                                                      >  1:934691/1‑140 (MQ=255)

         gATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAg                                                                                                                                   >  2:1350031/1‑140 (MQ=255)

         gATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAg                                                                                                                                   >  2:1170592/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATTGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  >  2:648461/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  >  1:850974/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  <  2:842879/140‑1 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  >  2:157572/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  >  1:1237294/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  >  2:491136/1‑140 (MQ=255)

          aTAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTCGCCGAAATCAAACACATGCTCGCCATAAGt                                                                                                                                  <  1:570854/140‑1 (MQ=255)

              aTTCAGCTAATGCTTTAGCAGCATC‑AAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACtt                                                                                                                             <  2:1274742/140‑1 (MQ=255)

               ttCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACtt                                                                                                                             >  1:410943/1‑140 (MQ=255)

               ttCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACtt                                                                                                                             <  2:1419582/140‑1 (MQ=255)

                  aGCTAATGCTTTAGCAGCATCAAATTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAg                                                                                                                          <  2:407271/140‑1 (MQ=255)

                    cTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTTCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTg                                                                                                                        <  2:1014112/140‑1 (MQ=255)

                    cTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTg                                                                                                                        <  1:1097090/140‑1 (MQ=255)

                      aaTGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGt                                                                                                                      <  1:157572/140‑1 (MQ=255)

                             tAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTgg                                                                                                                       <  2:481244/132‑1 (MQ=255)

                              agcagcATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGaa                                                                                                              <  1:1484574/140‑1 (MQ=255)

                                  gcaTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACctc                                                                                                          <  1:162395/140‑1 (MQ=255)

                                  gcaTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACctc                                                                                                          <  1:693348/140‑1 (MQ=255)

                                  gcaTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACctc                                                                                                          <  1:660848/140‑1 (MQ=255)

                                   caTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACctct                                                                                                         >  1:561922/1‑140 (MQ=255)

                                   caTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACctct                                                                                                         >  2:183009/1‑140 (MQ=255)

                                    aTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCtt                                                                                                        >  2:1016274/1‑140 (MQ=255)

                                    aTCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCtt                                                                                                        >  1:994302/1‑140 (MQ=255)

                                     tCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTtg                                                                                                       >  1:603487/1‑140 (MQ=255)

                                        aaaTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGc                                                                                                    <  1:1170592/140‑1 (MQ=255)

                                         aaTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGcc                                                                                                   <  2:850974/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  2:1468695/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  2:182875/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  1:1023760/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  1:635727/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  1:590645/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  1:1157435/140‑1 (MQ=255)

                                          aTTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCa                                                                                                  <  1:1403673/140‑1 (MQ=255)

                                             aTCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAggg                                                                                               >  1:931673/1‑140 (MQ=255)

                                              tCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGt                                                                                              >  2:506768/1‑140 (MQ=255)

                                               ccAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTg                                                                                             <  1:91626/140‑1 (MQ=255)

                                                cAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGc                                                                                            <  2:662872/140‑1 (MQ=255)

                                                  ggTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCgg                                                                                          <  1:33009/140‑1 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:1373420/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:1164394/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:519017/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:891913/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:785756/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  2:80211/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  1:1013966/1‑140 (MQ=255)

                                                   gTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGa                                                                                         >  2:868923/1‑140 (MQ=255)

                                                    tCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTAGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGaa                                                                                        <  1:930458/140‑1 (MQ=255)

                                                      ggCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACa                                                                                      <  1:22473/140‑1 (MQ=255)

                                                        ccATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGt                                                                                    >  2:1421051/1‑140 (MQ=255)

                                                        ccATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGt                                                                                    >  2:1418704/1‑140 (MQ=255)

                                                         cATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTg                                                                                   <  1:1373964/140‑1 (MQ=255)

                                                          atatCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGa                                                                                  <  2:262172/140‑1 (MQ=255)

                                                           tatCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGAc                                                                                 <  2:561922/140‑1 (MQ=255)

                                                           tatCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGAc                                                                                 <  2:789068/140‑1 (MQ=255)

                                                           tatCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGAc                                                                                 <  1:200129/140‑1 (MQ=255)

                                                            atCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGAct                                                                                >  2:1112640/1‑140 (MQ=255)

                                                             tCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGActc                                                                               >  2:1254744/1‑140 (MQ=255)

                                                             tCGGTTTCTGGACGATATTTTTTGATTGCTTCGAGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGActc                                                                               >  2:545890/1‑140 (MQ=255)

                                                               ggTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTg                                                                             <  1:535299/140‑1 (MQ=255)

                                                                gTTTCTGGACGATATTTTTTGATTGCTTCGCGCATTGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGt                                                                            <  1:648461/140‑1 (MQ=255)

                                                                  ttCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCa                                                                          >  2:54029/1‑140 (MQ=255)

                                                                    cTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGt                                                                        <  2:785756/140‑1 (MQ=255)

                                                                           atatTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTtcaatca                                                                 >  1:1097767/1‑140 (MQ=255)

                                                                           atatTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTtcaatca                                                                 <  1:516591/140‑1 (MQ=255)

                                                                             atTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCaaa                                                               <  1:1349943/140‑1 (MQ=255)

                                                                                  ttGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTg                                                          <  2:532262/140‑1 (MQ=255)

                                                                                      ttGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTaa                                                      >  2:670154/1‑140 (MQ=255)

                                                                                         cTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATcc                                                   >  2:1156699/1‑140 (MQ=255)

                                                                                           tCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGc                                                 <  2:736354/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  2:891913/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:506768/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  2:1013966/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:436940/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:1254744/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:1350031/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:836959/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:773889/140‑1 (MQ=255)

                                                                                             gcgcATGGTGAGTATTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                               <  1:841932/140‑1 (MQ=255)

                                                                                                cATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACg                                            <  2:724230/140‑1 (MQ=255)

                                                                                                cATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAAACAAATCGTGGTAATCCGCATACg                                            <  2:1307240/140‑1 (MQ=255)

                                                                                                      gAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGt                                      <  1:1112640/140‑1 (MQ=255)

                                                                                                      gAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGt                                      <  2:1097767/140‑1 (MQ=255)

                                                                                                       aGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTa                                     <  1:491136/140‑1 (MQ=255)

                                                                                                                     tttGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATtg                       <  2:622184/140‑1 (MQ=255)

                                                                                                                      ttGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATtgt                      <  2:1467990/140‑1 (MQ=255)

                                                                                                                      ttGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATtgt                      <  2:1373420/140‑1 (MQ=255)

                                                                                                                         ccGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGaa                   <  2:410943/140‑1 (MQ=255)

                                                                                                                         ccGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGaa                   <  2:931673/140‑1 (MQ=255)

                                                                                                                           gAAATCAAGCACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACt                 <  1:670154/140‑1 (MQ=255)

                                                                                                                           gAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACt                 <  1:309674/140‑1 (MQ=255)

                                                                                                                             aaTCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCa               >  2:1144502/1‑140 (MQ=255)

                                                                                                                               tCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTTAgg             >  1:575785/1‑140 (MQ=255)

                                                                                                                               tCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAgg             >  2:667950/1‑140 (MQ=255)

                                                                                                                                       aTGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAAAGTTCCATCATTGTGAACTCAGGATTATGGc     >  2:693172/1‑140 (MQ=255)

CGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAA  >  NC_000913/4353635‑4353912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.