BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	156,086	T→A	D39V (GAT→GTT)	yadV ←	putative fimbrial chaperone YadV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	156,086	0	T	A	100.0%	374.7 / NA	107	D39V (GAT→GTT)	yadV	putative fimbrial chaperone YadV
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (51/56); total (51/56)

Only 100 of 107 total aligned reads displayed.

GCGATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGATCGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGT  >  NC_000913/155949‑156220

gcgATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACg                                                                                                                                      <  2:1220712/140‑1 (MQ=255)

gcgATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACg                                                                                                                                      <  2:646815/140‑1 (MQ=255)

gcgATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACg                                                                                                                                      <  1:626903/140‑1 (MQ=255)

gcgATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACg                                                                                                                                      <  2:849474/140‑1 (MQ=255)

gcgATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACg                                                                                                                                      <  1:627298/140‑1 (MQ=255)

    tACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCttt                                                                                                                                  >  2:714599/1‑140 (MQ=255)

    tACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCttt                                                                                                                                  >  1:9769/1‑140 (MQ=255)

     aCTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCtttt                                                                                                                                 >  1:633073/1‑140 (MQ=255)

     aCTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCtttt                                                                                                                                 >  1:1130130/1‑140 (MQ=255)

     aCTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCtttt                                                                                                                                 <  1:1214851/140‑1 (MQ=255)

              gTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTAc                                                                                                                        >  2:973010/1‑140 (MQ=255)

              gTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTAc                                                                                                                        >  2:92090/1‑140 (MQ=255)

                     tAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTa                                                                                                                 <  1:1236175/140‑1 (MQ=255)

                              cTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATg                                                                                                        >  2:243430/1‑140 (MQ=255)

                               tGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGa                                                                                                       >  2:372611/1‑140 (MQ=255)

                               tGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGa                                                                                                       >  1:314265/1‑140 (MQ=255)

                               tGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGa                                                                                                       >  2:149968/1‑140 (MQ=255)

                                 tAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCGACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACa                                                                                                     <  1:618654/140‑1 (MQ=255)

                                 tAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACa                                                                                                     <  2:957621/140‑1 (MQ=255)

                                 tAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACa                                                                                                     <  1:1146765/140‑1 (MQ=255)

                                 tAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACa                                                                                                     <  1:294729/140‑1 (MQ=255)

                                 tAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACa                                                                                                     <  1:714599/140‑1 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  1:497596/1‑140 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  2:1243576/1‑140 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  1:722952/1‑140 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  2:230888/1‑140 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  1:1144074/1‑140 (MQ=255)

                                         ccAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGc                                                                                             >  2:1100636/1‑140 (MQ=255)

                                            ggCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAAt                                                                                          <  2:983720/140‑1 (MQ=255)

                                             gCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATa                                                                                         >  1:852097/1‑140 (MQ=255)

                                             gCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATa                                                                                         >  1:877485/1‑140 (MQ=255)

                                             gCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATa                                                                                         <  1:1028805/140‑1 (MQ=255)

                                                 aGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACg                                                                                     >  1:101731/1‑140 (MQ=255)

                                                 aGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACg                                                                                     <  1:684614/140‑1 (MQ=255)

                                                   cGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGAt                                                                                   >  2:1247411/1‑140 (MQ=255)

                                                   cGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGAt                                                                                   >  2:577731/1‑140 (MQ=255)

                                                   cGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGAt                                                                                   >  1:1186852/1‑140 (MQ=255)

                                                        tCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGTGAGTACCCGAAATGACAATGTCCGCAATAGTCGATGAACt                                                                              <  2:581779/140‑1 (MQ=255)

                                                        tCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACt                                                                              >  1:716410/1‑140 (MQ=255)

                                                           tCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTaaa                                                                           <  1:372611/140‑1 (MQ=255)

                                                                  tATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATa                                                                    >  1:327551/1‑140 (MQ=255)

                                                                   aTCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATAc                                                                   <  2:101731/140‑1 (MQ=255)

                                                                      tAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAgg                                                                <  1:973010/140‑1 (MQ=255)

                                                                       aaCCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGt                                                               >  2:219144/1‑140 (MQ=255)

                                                                        aCCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGtt                                                              >  2:527125/1‑140 (MQ=255)

                                                                           aaCTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACg                                                           <  2:706791/140‑1 (MQ=255)

                                                                           aaCTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACg                                                           <  2:1035807/140‑1 (MQ=255)

                                                                            aCTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGa                                                          >  2:1071314/1‑140 (MQ=255)

                                                                            aCTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGa                                                          >  2:1093630/1‑140 (MQ=255)

                                                                             ctctGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGaa                                                         >  2:285163/1‑140 (MQ=255)

                                                                             ctctGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGaa                                                         >  2:549683/1‑140 (MQ=255)

                                                                                    cAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATaaa                                                  <  1:230888/140‑1 (MQ=255)

                                                                                     aaGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAg                                                 <  2:1077945/140‑1 (MQ=255)

                                                                                     aaGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAg                                                 <  2:1130130/140‑1 (MQ=255)

                                                                                         aaCGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCtgt                                             <  1:149968/140‑1 (MQ=255)

                                                                                          aCGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACACTTTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCtgt                                             <  1:1094939/140‑1 (MQ=255)

                                                                                           cGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCtgttg                                           <  2:1144074/140‑1 (MQ=255)

                                                                                            gggTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCtgttgt                                          >  1:1112200/1‑140 (MQ=255)

                                                                                            gggTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCtgttgt                                          >  1:507893/1‑140 (MQ=255)

                                                                                                 aTTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGtt                                     <  2:944889/140‑1 (MQ=255)

                                                                                                 aTTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGtt                                     >  2:98469/1‑140 (MQ=255)

                                                                                                 aTTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGtt                                     >  2:139972/1‑140 (MQ=255)

                                                                                                 aTTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGtt                                     <  1:92090/140‑1 (MQ=255)

                                                                                                 aTTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGtt                                     >  1:1148494/1‑140 (MQ=255)

                                                                                                  ttCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGttt                                    <  2:716410/140‑1 (MQ=255)

                                                                                                  ttCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGttt                                    >  2:969537/1‑140 (MQ=255)

                                                                                                  ttCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGttt                                    >  2:926488/1‑140 (MQ=255)

                                                                                                  ttCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGttt                                    >  1:174741/1‑140 (MQ=255)

                                                                                                    cccTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTgg                                  <  2:252751/140‑1 (MQ=255)

                                                                                                    cccTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTgg                                  <  1:549683/140‑1 (MQ=255)

                                                                                                        ttATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGtt                              >  1:1030720/1‑140 (MQ=255)

                                                                                                        ttATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGtt                              >  2:815319/1‑140 (MQ=255)

                                                                                                         tATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTa                             >  2:426064/1‑140 (MQ=255)

                                                                                                         tATTTTCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTa                             >  2:912595/1‑140 (MQ=255)

                                                                                                           ttttCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTaaa                           <  1:219144/140‑1 (MQ=255)

                                                                                                            tttCCAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGATAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTaaaa                          >  2:820175/1‑140 (MQ=255)

                                                                                                               ccAGACGTACGTTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAAc                       >  1:277335/1‑140 (MQ=255)

                                                                                                                    cgtacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATaaa                  <  1:1071314/140‑1 (MQ=255)

                                                                                                                     gtacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAAc                 >  2:1044017/1‑140 (MQ=255)

                                                                                                                      tacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAAcc                <  2:877485/140‑1 (MQ=255)

                                                                                                                      tacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAAcc                <  2:722952/140‑1 (MQ=255)

                                                                                                                      tacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAAcc                <  2:633073/140‑1 (MQ=255)

                                                                                                                      tacgtTGACAC‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAAcc                <  1:243430/140‑1 (MQ=255)

                                                                                                                             acac‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTg         >  2:276691/1‑140 (MQ=255)

                                                                                                                              cac‑TTTTTTGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGa        <  2:497596/140‑1 (MQ=255)

                                                                                                                                  ttttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATag     >  1:24595/1‑140 (MQ=255)

                                                                                                                                   tttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATaga    >  1:772605/1‑140 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:1112200/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:238448/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:174741/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:9769/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:1093630/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:1243576/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:577731/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:139972/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:314265/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:427575/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  2:507893/140‑1 (MQ=255)

                                                                                                                                    ttttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATagag   <  1:293032/140‑1 (MQ=255)

                                                                                                                                     tttGAACGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGt  <  1:422412/140‑1 (MQ=255)

GCGATACTGGCGGCGTAGCAGTAAAAGGGACTGTAATACTGCCAGGCTCAGCGTTGTCATCGCCAGTATCTAACCAACTCTGGACAAGCAACGGGTTATTCCCTTTATTTTCCAGACGTACGTTGACAC‑TTTTTTGATCGCTTTTATATATTACGCGAGTACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGT  >  NC_000913/155949‑156220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`