| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4492072 = | 180 (1.760) | 3 (0.030) | 3/262 | 8.9 | 2.0% | coding (454/1320 nt) | idnT | L‑idonate/5‑ketogluconate/gluconate transporter |
| ? | NC_000913 | 4492182 = | 128 (1.330) | coding (344/1320 nt) | idnT | L‑idonate/5‑ketogluconate/gluconate transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4492218‑4492072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccactTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGC > NC_000913/4492182‑4492321 TCACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTA < 1:1319906/140‑1 ACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAAC > 2:1197694/1‑140 ACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAAC < 2:621728/140‑1 CCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACC < 1:264178/140‑1 GGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCA < 1:550812/140‑1 GTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCAC > 1:1499074/1‑140 TCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGTGCTCTCTGTAACCCACT > 1:1547154/1‑140 TCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACT > 2:1092654/1‑140 TCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACT > 2:1133834/1‑140 aaacAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACTTCAAAAAACATGGCGAGGCCCACAAC < 2:1263112/136‑1 CTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACTTCAAAAAACATGGCGAGGCCCACAACCA < 2:2933/122‑1 CTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACTTCAAAAAACATGGCGAGGCCCACAACCA > 1:2933/1‑122 AACCCACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCT > 2:977359/1‑140 CCCACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAA > 1:1712027/1‑140 CACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACA > 1:268979/1‑140 CACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACA > 1:454378/1‑140 CACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACA > 2:1602048/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:346339/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:774680/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:1727563/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:828411/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:896178/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:1111904/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:1076211/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 2:1036477/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:1406426/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:1679265/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:229182/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:698063/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:779819/1‑140 ACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACAT > 1:806791/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:439774/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:1260465/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:1299002/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:1162836/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:796840/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:1423947/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:545680/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:489857/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:489117/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:335090/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:527070/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 1:541619/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATG > 2:1233495/1‑140 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACA < 1:152549/138‑1 CTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACA > 2:152549/1‑138 CTTCAAAAAACATGGC‑‑GGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGC > 2:1180623/1‑140 CTTCAAAAAAAATGGCGAGGCCCCCAACCAGACCGGTGATCACTAGCGCCCATTGCACGGGTTTTTAACCAAAAGTAGAAATCAGCGTAGTGGCGTTACGTTGTGCGGCACCCGTATCAAAAATAAGCTTGCCTAACATG > 2:1711128/1‑140 TCACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4492218‑4492072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccactTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAAGTAGCAATCAGCGTAGTGGCGATACGTTGTGCCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGC > NC_000913/4492182‑4492321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |