| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,443,976 | A→T | I41N (ATC→AAC) | secY ← | Sec translocon subunit SecY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,443,976 | 0 | A | T | 98.2% | 362.1 / NA | 109 | I41N (ATC→AAC) | secY | Sec translocon subunit SecY |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (55/52); minor base C (2/0); total (57/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 110 total aligned reads displayed.
ATACGGCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGATCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTACTTATTCCT > NC_000913/3443843‑3444112 | ataCGGCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGaa < 2:661322/140‑1 (MQ=255) ggCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATaaa < 1:1561235/140‑1 (MQ=255) ggCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATaaa > 1:439686/1‑140 (MQ=255) ggCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATaaa < 1:140675/140‑1 (MQ=255) cATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAag > 1:641226/1‑140 (MQ=255) aTGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAaga > 1:1573432/1‑140 (MQ=255) gATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATACAAGAGc > 2:1545778/1‑140 (MQ=255) gATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGc < 2:1028575/140‑1 (MQ=255) gATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGc > 2:1026384/1‑140 (MQ=255) aTCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGcc > 2:539592/1‑140 (MQ=255) tCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCa > 1:908189/1‑140 (MQ=255) tCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCa < 2:55188/140‑1 (MQ=255) ccAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATa < 1:1430344/140‑1 (MQ=255) cAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATAc < 1:648425/140‑1 (MQ=255) cAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATAc < 2:809603/140‑1 (MQ=255) cAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATAc < 1:220818/140‑1 (MQ=255) agagCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACg > 2:19237/1‑140 (MQ=255) agagCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACg > 1:659386/1‑140 (MQ=255) agagCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACg > 2:1451668/1‑140 (MQ=255) gagCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACgg < 1:1102617/140‑1 (MQ=255) gCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTGGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGaa < 2:345155/140‑1 (MQ=255) cAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAac < 1:1254897/140‑1 (MQ=255) aaaGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAaca > 1:426495/1‑140 (MQ=255) aaGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAacac < 2:1084912/140‑1 (MQ=255) aaGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAacac > 1:337901/1‑140 (MQ=255) gAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGTATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAg > 1:1371752/1‑140 (MQ=255) aGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAgcg < 2:1650443/140‑1 (MQ=255) aGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAgc > 1:671229/1‑139 (MQ=255) aGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAgc < 2:671229/139‑1 (MQ=255) gCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAgcgc < 1:1451668/140‑1 (MQ=255) aCGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCAc < 2:439686/140‑1 (MQ=255) ggCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCg > 1:1434700/1‑140 (MQ=255) gCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGa < 1:940659/140‑1 (MQ=255) tGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATa < 1:1635423/140‑1 (MQ=255) agCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATaacaa > 2:234137/1‑140 (MQ=255) agCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATaacaa > 2:1131636/1‑140 (MQ=255) caccacCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATaacaaac > 2:131670/1‑140 (MQ=255) accaccAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATaacaaaca > 2:1292840/1‑140 (MQ=255) accaccAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATaacaaaca > 2:152441/1‑140 (MQ=255) caccaGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAAcagc > 2:158585/1‑140 (MQ=255) caccaGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAAcagc > 1:71340/1‑140 (MQ=255) gagaACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCt < 1:1727413/140‑1 (MQ=255) gagaACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCt > 1:767746/1‑140 (MQ=255) aaCATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCg > 2:1255340/1‑140 (MQ=255) gTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCa > 1:1220688/1‑140 (MQ=255) gTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCa > 1:611253/1‑140 (MQ=255) tAAACATCTCAATCATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGc < 1:1045780/140‑1 (MQ=255) aaaCATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCt < 1:1724679/140‑1 (MQ=255) aCATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCg < 1:131670/140‑1 (MQ=255) aCATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGCTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCg > 1:1721667/1‑140 (MQ=255) aTCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGcc < 1:1043007/140‑1 (MQ=255) tctcAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCt < 2:641226/140‑1 (MQ=255) ctcAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTa > 2:235357/1‑140 (MQ=255) tcAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTaa > 2:359251/1‑140 (MQ=255) tcAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTaa > 2:1413929/1‑140 (MQ=255) tcAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTaa > 2:219600/1‑140 (MQ=255) cAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAg > 1:685166/1‑140 (MQ=255) cAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAg > 2:1382895/1‑140 (MQ=255) tgGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCt > 1:1728262/1‑140 (MQ=255) tGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTg > 2:448728/1‑140 (MQ=255) ccTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATGAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGc > 2:1122302/1‑140 (MQ=255) ccTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGc > 2:894932/1‑140 (MQ=255) ccTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGc > 2:1612197/1‑140 (MQ=255) tCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCAc < 1:320721/140‑1 (MQ=255) cGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACt < 2:1179381/140‑1 (MQ=255) cGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACt < 1:144430/140‑1 (MQ=255) cTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACttt > 1:763584/1‑140 (MQ=255) gTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGa < 1:1159825/140‑1 (MQ=255) gTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGa < 1:1188729/140‑1 (MQ=255) gTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGa < 1:362152/140‑1 (MQ=255) gTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGa < 1:539592/140‑1 (MQ=255) gCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGaaaa > 1:1645926/1‑140 (MQ=255) tCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATc > 2:1615342/1‑140 (MQ=255) cAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCt < 1:234691/140‑1 (MQ=255) aGTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATcc < 1:894932/140‑1 (MQ=255) gTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATccc < 1:1413929/140‑1 (MQ=255) gTTTGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATccc < 1:19237/140‑1 (MQ=255) ttGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCgg < 2:169737/140‑1 (MQ=255) ttGGCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCgg < 1:234137/140‑1 (MQ=255) gCAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGgttg > 1:807327/1‑140 (MQ=255) cAAGTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGCCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGgttgt > 1:396812/1‑140 (MQ=255) gTACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTa > 1:766356/1‑140 (MQ=255) tACAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAg < 2:337901/140‑1 (MQ=255) aCAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGc > 1:1150970/1‑140 (MQ=255) cAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGcc < 1:1608031/140‑1 (MQ=255) cAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGcc < 2:1573432/140‑1 (MQ=255) cAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGcc < 1:641968/140‑1 (MQ=255) cAGCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGcc < 1:1334351/140‑1 (MQ=255) gCGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCAt < 1:1491902/140‑1 (MQ=255) cGGCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATc > 1:1406003/1‑140 (MQ=255) ggCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCt < 1:751287/140‑1 (MQ=255) gCATCAATACCAGGGTTCGGAATGAAAGAGCCAATACGGAACGCAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTg < 2:192993/140‑1 (MQ=255) gCATCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTg < 2:763584/140‑1 (MQ=255) aTCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCt < 2:585922/140‑1 (MQ=255) tCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTa > 2:1508872/1‑140 (MQ=255) tCAATACCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTCGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTa > 1:857923/1‑140 (MQ=255) tCAATACCAGGGCTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTa > 2:159499/1‑140 (MQ=255) aCCAGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATATGCTACTTAt > 2:880618/1‑140 (MQ=255) aGGGTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTACTTATTcc > 1:1277316/1‑140 (MQ=255) gggTTCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTCCTTATTCCt > 1:336549/1‑140 (MQ=255) | ATACGGCATGATCCCCAGAGCAAAGATAGAAGCACGGCTGAGAGCACCACCAGAGAACATGTTAAACATCTCAATGATGGTGCCTCGCTGTTGCTCAAGCAGTTTGGCAAGTACAGCGGCATCAATACCAGGGATCGGAATAAAAGAGCCAATACGGAACACAATCAGCGCACCGATAACAAACAGCAGTCTGCGTTTCAGCTCGCCTAAGCCACCTTTGGCACTTTGAAAATCTAATCCCGGTTGTTTAGCCATCTGCTACTTATTCCT > NC_000913/3443843‑3444112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |