Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,478,336	C→T	intergenic (‑25/‑137)	argI ← / → rraB	ornithine carbamoyltransferase ArgI/ribonuclease E inhibitor protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,478,336	0	C	T	100.0%	335.6 / NA	94	intergenic (‑25/‑137)	argI/rraB	ornithine carbamoyltransferase ArgI/ribonuclease E inhibitor protein B
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (41/53);  total (41/53)

TACCGCTTTTCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTCAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAGC  >  NC_000913/4478200‑4478471                                                                                                                                         |                                                                                                                                        tACCGCTTTTCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAAt                                                                                                                                      >  2:1048991/1‑140 (MQ=255) tACCGCTTTTCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAAt                                                                                                                                      <  1:1452367/140‑1 (MQ=255)     gCTTTTCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGGTCCCTCCTGTGGCTAACGCCTTAATGAAt                                                                                                                                  <  1:790866/140‑1 (MQ=255)        tttCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAACCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTaa                                                                                                                               >  2:1564558/1‑140 (MQ=255)         ttCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTaaa                                                                                                                              >  1:72844/1‑140 (MQ=255)            ttATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAAtt                                                                                                                           <  1:745137/140‑1 (MQ=255)            ttATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAAtt                                                                                                                           <  2:1172318/140‑1 (MQ=255)             tATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTc                                                                                                                          <  2:543671/140‑1 (MQ=255)             tATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTc                                                                                                                          <  2:1388682/140‑1 (MQ=255)                  gCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAAttt                                                                                                                     <  2:897021/140‑1 (MQ=255)                     ttCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTtata                                                                                                                  <  1:8271/140‑1 (MQ=255)                     ttCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTtata                                                                                                                  >  2:802338/1‑140 (MQ=255)                      tCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTatat                                                                                                                 >  2:861952/1‑140 (MQ=255)                       cAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATg                                                                                                                <  2:518317/140‑1 (MQ=255)                       cAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATg                                                                                                                <  1:182327/140‑1 (MQ=255)                        aGCTTCGCTGCTGACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTGCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATgg                                                                                                               <  1:468413/140‑1 (MQ=255)                        aGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATgg                                                                                                               <  1:79677/140‑1 (MQ=255)                        aGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATgg                                                                                                               <  2:767037/140‑1 (MQ=255)                          cTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGgat                                                                                                             <  2:95330/140‑1 (MQ=255)                             cgcgGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGgatgat                                                                                                          >  1:1298053/1‑140 (MQ=255)                              gcgGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGatt                                                                                                         <  2:740495/140‑1 (MQ=255)                              gcgGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGatt                                                                                                         <  1:1556157/140‑1 (MQ=255)                               cgGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGAT‑CCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGattat                                                                                                       >  1:6183/1‑140 (MQ=255)                                       tGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTg                                                                                                <  2:120104/140‑1 (MQ=255)                                            cagGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGt                                                                                           >  1:940954/1‑140 (MQ=255)                                              ggCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCt                                                                                         <  2:8935/140‑1 (MQ=255)                                               gCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTa                                                                                        <  1:1694302/140‑1 (MQ=255)                                               gCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTa                                                                                        <  1:1184152/140‑1 (MQ=255)                                               gCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGAT‑CCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTaa                                                                                       <  2:6183/140‑1 (MQ=255)                                                 tGTTGAGTTCAGCTGACGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTaaa                                                                                      >  2:957601/1‑140 (MQ=255)                                                    tGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCa                                                                                   >  2:885895/1‑140 (MQ=255)                                                        ttCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATaaa                                                                               >  2:1398281/1‑140 (MQ=255)                                                        ttCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATaaa                                                                               >  1:1413563/1‑140 (MQ=255)                                                         tCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAAt                                                                              >  2:926594/1‑140 (MQ=255)                                                          cAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATc                                                                             >  2:1361204/1‑140 (MQ=255)                                                             cTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCttt                                                                          >  1:1316075/1‑140 (MQ=255)                                                               ggCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCAGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGt                                                                        >  2:1208732/1‑140 (MQ=255)                                                                   tGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTcaca                                                                    <  2:540025/140‑1 (MQ=255)                                                                     aaaTCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACaaa                                                                  >  2:1670302/1‑140 (MQ=255)                                                                       aTCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAgg                                                                <  1:1501886/140‑1 (MQ=255)                                                                        tCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGt                                                               <  2:890895/140‑1 (MQ=255)                                                                         cGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTg                                                              <  2:1172179/140‑1 (MQ=255)                                                                         cGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTg                                                              <  2:72844/140‑1 (MQ=255)                                                                         cGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTg                                                              <  2:1253942/140‑1 (MQ=255)                                                                           aGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGa                                                            <  1:1591916/140‑1 (MQ=255)                                                                           aGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGa                                                            <  1:1251484/140‑1 (MQ=255)                                                                            gTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTgggg                                                           >  1:1240463/1‑138 (MQ=255)                                                                              aaTTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGc                                                         <  1:22492/140‑1 (MQ=255)                                                                                tttCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCaa                                                       >  2:504146/1‑140 (MQ=255)                                                                                tttCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCaa                                                       >  2:1054801/1‑140 (MQ=255)                                                                                tttCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCaa                                                       <  2:716717/140‑1 (MQ=255)                                                                                tttCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCaa                                                       <  1:1522168/140‑1 (MQ=255)                                                                                tttCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCaa                                                       >  1:1407738/1‑140 (MQ=255)                                                                                     ggAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCa                                                  <  2:1382930/140‑1 (MQ=255)                                                                                      gAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAg                                                 <  2:1662409/140‑1 (MQ=255)                                                                                      gAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAg                                                 <  2:1138243/140‑1 (MQ=255)                                                                                        aaTGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAgtg                                               <  1:153949/140‑1 (MQ=255)                                                                                           gCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAgtggtg                                            <  1:957601/140‑1 (MQ=255)                                                                                            cTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGgtgt                                           <  2:1327367/140‑1 (MQ=255)                                                                                              tATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGgtgtgt                                         <  1:278132/140‑1 (MQ=255)                                                                                                 gATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGAc                                      <  2:1076229/140‑1 (MQ=255)                                                                                                    aaaaCCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAAt                                   >  2:1302236/1‑140 (MQ=255)                                                                                                    aaaaCCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAAt                                   >  2:260672/1‑140 (MQ=255)                                                                                                     aaaCCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATa                                  <  1:861952/140‑1 (MQ=255)                                                                                                      aaCCCGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATaa                                 >  1:1044592/1‑140 (MQ=255)                                                                                                        cccGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAaga                               <  2:108373/140‑1 (MQ=255)                                                                                                          cGGACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGt                             >  1:93431/1‑140 (MQ=255)                                                                                                           ggACATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTa                            >  1:1189312/1‑140 (MQ=255)                                                                                                             aCATAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATc                          >  1:1296525/1‑140 (MQ=255)                                                                                                                tAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGc                       <  2:665395/140‑1 (MQ=255)                                                                                                                tAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGc                       <  1:1048991/140‑1 (MQ=255)                                                                                                                tAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGc                       <  1:1345531/140‑1 (MQ=255)                                                                                                                tAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGc                       <  1:885895/140‑1 (MQ=255)                                                                                                                tAGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGc                       <  2:1187376/140‑1 (MQ=255)                                                                                                                 aGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCa                      <  2:1298053/140‑1 (MQ=255)                                                                                                                 aGATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCa                      >  1:1306734/1‑140 (MQ=255)                                                                                                                  gATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAg                     >  2:1014860/1‑140 (MQ=255)                                                                                                                  gATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAg                     <  1:498396/140‑1 (MQ=255)                                                                                                                  gATCCCTCCTGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAg                     <  2:1296525/140‑1 (MQ=255)                                                                                                                      cctcctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACa                 >  1:701105/1‑140 (MQ=255)                                                                                                                       ctcctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACAt                >  1:444767/1‑140 (MQ=255)                                                                                                                       ctcctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACAt                >  1:614749/1‑140 (MQ=255)                                                                                                                       ctcctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGAAAt                >  2:1515623/1‑140 (MQ=255)                                                                                                                        tcctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACAtt               >  2:1619137/1‑140 (MQ=255)                                                                                                                         cctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTa              >  2:1535099/1‑140 (MQ=255)                                                                                                                          ctGTGGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTaa             <  1:1714911/140‑1 (MQ=255)                                                                                                                            gtgGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAaga           <  2:940954/140‑1 (MQ=255)                                                                                                                             tgGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCCCAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAagag          >  2:404683/1‑140 (MQ=255)                                                                                                                             tgGCTAACGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAagag          >  1:77700/1‑140 (MQ=255)                                                                                                                                    tgCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAg   >  2:1311080/2‑140 (MQ=255)                                                                                                                                    cGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAg   >  1:1730331/1‑140 (MQ=255)                                                                                                                                    cGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAg   >  2:1576984/1‑140 (MQ=255)                                                                                                                                    cGCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAg   >  1:1034648/1‑140 (MQ=255)                                                                                                                                     gCCTTAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAGc  <  1:1670302/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        TACCGCTTTTCTTATCGGCTTTCAGCTTCGCGGCTAACTGCAGCAGGCTGTTGAGTTCAGCTGGCGTGAAATCGAGTAATTTCAGGAAATGCTTATGATAAAACCCGGACATAGATCCCTCCTGTGGCTAACGCCTCAATGAATTAAAATTCAATTTATATGGATGATTATTCATTTGCAAGTCTAAAGCATAAATCTTTGTCACAAAGGTGGAGGCAATGTCAGTGGTGTGTGACAATAAGAGTATCGGCAGGACATTAAGAGGAATGAGC  >  NC_000913/4478200‑4478471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑