Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,779,317 IS1 (–) +9 bp intergenic (‑16/‑292) ydiP ← / → ydiQ putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)104 (1.120) 63/278 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 1779317 = 0 (0.000)intergenic (‑16/‑300) ydiP/ydiQ putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ
* ? NC_000913 = 17793250 (0.000)83 (0.890) 59/278 0.2 100% intergenic (‑24/‑292) ydiP/ydiQ putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ
?NC_000913 1978503 = NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 104 total aligned reads displayed.

GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258539‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGC  >  NC_000913/1779317‑1779452
                                                                                                                                                                                                                                                                                 
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCA                                                                                                                                       >  2:533406/1‑140
    TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAG                                                                                                                                   <  2:1430885/140‑1
    TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAG                                                                                                                                   >  1:158602/1‑140
    TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAG                                                                                                                                   <  1:1208216/140‑1
      CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGTAGCATCACCCCATGAGCA                                                                                                                                 >  2:1049814/1‑140
        GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAG                                                                                                                               <  1:679167/140‑1
            TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCGTCACCCCATGAGCAAGCAAA                                                                                                                           >  1:1015792/1‑140
             GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAA                                                                                                                          <  2:603687/140‑1
             GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAA                                                                                                                          <  2:1225112/140‑1
              CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAA                                                                                                                         <  1:1301477/140‑1
              CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAA                                                                                                                         >  1:1403813/1‑140
              CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAA                                                                                                                         <  1:533406/140‑1
                      GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATAT                                                                                                                 >  1:240779/1‑140
                       TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATG                                                                                                                <  1:1351624/140‑1
                        TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGC                                                                                                               >  2:895289/1‑140
                         ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCC                                                                                                              <  2:708152/140‑1
                           GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGTAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGG                                                                                                            <  1:1049814/140‑1
                                 CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAA                                                                                                      >  1:338952/1‑140
                                    CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATAC                                                                                                   >  1:617245/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  2:902902/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  2:1158125/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:585909/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:414797/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:641092/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  2:445118/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:1178839/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:1128932/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  1:1121816/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGT                                                                                              >  2:68412/1‑140
                                            GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTA                                                                                           >  2:1042300/1‑140
                                             aTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACATTAAATCAGTAAGTTGGCAGCATCTCACCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGAGTGTAT                                                                                          <  2:1426895/139‑1
                                             CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTAT                                                                                          <  2:709101/140‑1
                                             CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTAT                                                                                          <  2:1328421/140‑1
                                                AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGC                                                                                       >  2:21324/1‑140
                                                  CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGG                                                                                     <  2:1298223/140‑1
                                                    GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTT                                                                                   >  1:220966/1‑140
                                                       GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATA                                                                                >  1:824105/1‑140
                                                           CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAAC                                                                            <  2:335817/140‑1
                                                                GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGT                                                                       <  1:876828/140‑1
                                                                     AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGC                                                                  <  2:960802/140‑1
                                                                        CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAG                                                               >  1:1218868/1‑140
                                                                         AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGg                                                              >  1:137195/1‑139
                                                                          GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAG                                                             <  2:618495/140‑1
                                                                           AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTTCGGTTATACAAACGCGTTTAGCGAGAGC                                                            >  2:319739/1‑140
                                                                           AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGC                                                            >  2:783475/1‑140
                                                                            AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCT                                                           <  1:1305724/140‑1
                                                                            AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCT                                                           <  2:1385744/140‑1
                                                                             GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTA                                                          <  1:353753/140‑1
                                                                              CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAA                                                         <  1:783475/140‑1
                                                                                  TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAA                                                     >  1:375296/1‑140
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  2:1254159/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  2:158602/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  2:220966/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  1:368972/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  1:584443/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  1:1002374/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAG                                                    <  2:641092/140‑1
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATT                                              >  2:685956/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATT                                              >  2:328185/1‑140
                                                                                          CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCCCGTTTAGCGAGAGCTAAACAAGATTATTT                                             >  2:669527/1‑140
                                                                                            CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTAC                                           >  1:458907/1‑140
                                                                                            CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTAC                                           >  2:637478/1‑140
                                                                                               AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACT                                        <  1:902902/140‑1
                                                                                               AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACT                                        <  1:1116536/140‑1
                                                                                               AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACT                                        <  1:1219178/140‑1
                                                                                                 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCCCGTTTAGCAACAGCTCAACAAGATTATTTACACTGA                                      >  1:1028570/1‑140
                                                                                                    CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATG                                   >  1:182181/1‑140
                                                                                                    CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATG                                   >  2:539582/1‑140
                                                                                                      ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCA                                 <  2:240779/140‑1
                                                                                                          TACACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGAT                             >  1:165767/1‑140
                                                                                                             ACTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGT                          >  1:314681/1‑140
                                                                                                              CTAAATCAGTAAGTTGGCAGCGTCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTA                         <  2:1015792/140‑1
                                                                                                              CTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTA                         <  1:895289/140‑1
                                                                                                              CTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTA                         <  1:1158125/140‑1
                                                                                                              CTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTA                         <  2:1403813/140‑1
                                                                                                              CTAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCAGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTA                         >  2:869937/1‑140
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGTCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTAC                        >  2:14549/1‑140
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTAC                        <  2:338952/140‑1
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTAC                        >  2:331869/1‑140
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTAC                        >  2:576095/1‑140
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTAC                        >  1:1534714/1‑140
                                                                                                                AAATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACG                       <  2:1121816/140‑1
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTTTAAAACCGCGCTTAACCAGAGGTAAACAAGATTATTTACACTTAATGCAATATTGTACGG                      >  2:794614/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGG                      >  2:709827/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGG                      >  2:987444/1‑140
                                                                                                                  ATCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGT                     <  2:1218868/140‑1
                                                                                                                   TCAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTATGGTC                    <  2:809869/140‑1
                                                                                                                    CAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCA                   <  2:585909/140‑1
                                                                                                                    CAGTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCA                   <  2:1178839/140‑1
                                                                                                                      GTAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATG                 >  2:1527128/1‑140
                                                                                                                       TAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTTCGGTTATACAACCGCGATTAGCGAGAGCTCAACAAGATTGTTTACACTTAATGCAAGATTGTACGGTCATGG                >  2:191386/1‑140
                                                                                                                       TAAGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGG                <  2:824105/140‑1
                                                                                                                         AGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAA              >  2:629866/1‑140
                                                                                                                         AGTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAA              >  2:350875/1‑140
                                                                                                                          GTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATGAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGTAAT             <  2:1378859/140‑1
                                                                                                                          GTTGGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAAT             <  2:1394431/140‑1
                                                                                                                             GGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAAC          >  2:329080/1‑140
                                                                                                                             GGCAGCATCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAAC          >  1:877800/1‑140
                                                                                                                                    TCACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTG   <  1:970073/140‑1
                                                                                                                                     CACCCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGC  >  1:927085/1‑140
                                                                                                                                                                                                                                                                                 
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258539‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTGTATTGCGGTTATACAACCGCGTTTAGCGAGAGCTAAACAAGATTATTTACACTGAATGCAAGATTGTACGGTCATGGAATAACTATATTGC  >  NC_000913/1779317‑1779452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.