BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,531,440	0	A	C	22.9%	270.9 / 24.0	119	Y334D (TAT→GAT)	yhgE	putative transport protein YhgE
Reads supporting (aligned to +/- strand): ref base A (63/28); new base C (0/27); total (63/56)
Fisher's exact test for biased strand distribution p-value = 1.20e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

GCTAATGCGCATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAGC  >  NC_000913/3531303‑3531575

     tGCGCATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGc                                                                                                                                  >  1:644873/1‑140 (MQ=255)

     tGCGCATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGc                                                                                                                                  >  2:233146/1‑140 (MQ=255)

        gcATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGAc                                                                                                                               <  1:1153660/140‑1 (MQ=255)

        gcATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCCTTACGCCAGACGATGCTGACAAAATACCCCAGCGAc                                                                                                                               <  2:560464/140‑1 (MQ=255)

         cATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGAcc                                                                                                                              <  2:878166/140‑1 (MQ=255)

         cATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCGGACAAAATCCCCCAGCGAcc                                                                                                                              <  2:1032202/140‑1 (MQ=255)

          aTACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACca                                                                                                                             <  1:919920/140‑1 (MQ=255)

           tACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACcac                                                                                                                            <  1:32892/140‑1 (MQ=255)

           tACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACcac                                                                                                                            <  2:674646/140‑1 (MQ=255)

              tGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACAcc                                                                                                                         >  1:1384820/1‑140 (MQ=255)

                tCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAg                                                                                                                       >  2:302750/1‑140 (MQ=255)

                tCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAg                                                                                                                       >  1:846397/1‑140 (MQ=255)

                 ccAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGt                                                                                                                      <  1:1358212/140‑1 (MQ=255)

                 ccAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGt                                                                                                                      <  1:874355/140‑1 (MQ=255)

                 ccAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGt                                                                                                                      <  2:764241/140‑1 (MQ=255)

                     cACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAaca                                                                                                                  >  2:1443297/1‑140 (MQ=255)

                     cACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAaca                                                                                                                  <  1:887784/140‑1 (MQ=255)

                        cGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCa                                                                                                               >  2:441531/1‑140 (MQ=255)

                          gCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGc                                                                                                             >  2:28549/1‑140 (MQ=255)

                          gCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGc                                                                                                             >  1:1489709/1‑140 (MQ=255)

                          gCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGc                                                                                                             >  2:135958/1‑140 (MQ=255)

                          gCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGc                                                                                                             >  2:563355/1‑140 (MQ=255)

                          gCGAATCAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGc                                                                                                             >  2:961268/1‑140 (MQ=255)

                               ttAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGc                                                                                                        >  1:442852/1‑140 (MQ=255)

                                   gaagCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTACCACCAGCACCGCCAGc                                                                                                    <  2:846397/140‑1 (MQ=255)

                                      acACCAGTATCACCAACACCAACAACGAACCCACAAGGTTCACTTTCCCCTCAAAAACAACGGGATTTTGCCCTTTACCCCAGACGATGCTGACAAAATACCCCAGCAACCACACCAGTAACACCACCACCGCCAGCACg                                                                                                 <  2:572089/139‑1 (MQ=255)

                                       cACCAGTATCCCCAACACCAATAACGAACCCGCAAGGTCCACTTTGCCCTGAAAAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACCCCAGCACCGCCAGCACGc                                                                                                <  2:912201/140‑1 (MQ=255)

                                        aCCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGcc                                                                                               >  1:73346/1‑140 (MQ=255)

                                         ccAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGccc                                                                                              >  1:545056/1‑140 (MQ=255)

                                          cAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCt                                                                                             >  1:1550255/1‑140 (MQ=255)

                                            gTATCACCAACACCAATAACGAACCCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGc                                                                                           <  2:909971/140‑1 (MQ=255)

                                            gTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGc                                                                                           <  1:440594/140‑1 (MQ=255)

                                               tCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAg                                                                                        <  1:233146/140‑1 (MQ=255)

                                                caccaacaccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTAACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGc                                                                                       <  1:1567004/140‑1 (MQ=255)

                                                 cccaacaccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACCCCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCg                                                                                      <  2:290056/139‑1 (MQ=255)

                                                  ccaacaccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCgg                                                                                     >  2:628205/1‑140 (MQ=255)

                                                   caaccccaaAAACGAAACCGCAAGGTCCGCTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCGGACGATGCTGACAAAATTCCCCACGGACCACGCCAGAAACACCAGCTCCGCCAGCACGCCCTGCAAGCGGt                                                                                    <  2:1316446/140‑1 (MQ=255)

                                                    aacaccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTc                                                                                   >  2:694260/1‑140 (MQ=255)

                                                      ccccaaTAACGAAACCGCAAGGTTCACTTGGCCCTGAAGAACACCGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACCCCATTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGa                                                                                 <  1:441531/138‑1 (MQ=255)

                                                      caccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGa                                                                                 >  2:1247147/1‑140 (MQ=255)

                                                      caccaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGa                                                                                 >  1:384940/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  2:1296081/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  2:438627/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  1:570921/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  2:1519618/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  2:357698/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  1:432620/1‑140 (MQ=255)

                                                       accaaTAACGAAACCGCAAGGTTCACTTTGCCATGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGAc                                                                                >  1:566333/1‑140 (MQ=255)

                                                          aaTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGt                                                                             >  1:518521/1‑140 (MQ=255)

                                                           aTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTc                                                                            <  1:694260/140‑1 (MQ=255)

                                                           aTAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTc                                                                            >  2:882198/1‑140 (MQ=255)

                                                            tAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTcc                                                                           >  2:471907/1‑140 (MQ=255)

                                                            tAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTcc                                                                           >  1:727509/1‑140 (MQ=255)

                                                               cGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGc                                                                        >  1:57198/1‑140 (MQ=255)

                                                                gAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGcc                                                                       >  1:1195896/1‑140 (MQ=255)

                                                                 aaaCCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCg                                                                      >  2:219893/1‑140 (MQ=255)

                                                                 aaaCCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCg                                                                      >  1:19694/1‑140 (MQ=255)

                                                                  acccGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGt                                                                     <  2:518719/138‑1 (MQ=255)

                                                                   cccccAAGGTTCACTTTGCCCTGAAGAACAGCGGGATTTAGCCCTTTACGCCGGTGGATGCGGACAAAATACCCCAGCCACCCCCCCAGAACCCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTa                                                                    <  2:1136921/136‑1 (MQ=255)

                                                                   aCCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACCCCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTa                                                                    <  2:1508275/140‑1 (MQ=255)

                                                                   aCCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTa                                                                    >  1:1503782/1‑140 (MQ=255)

                                                                       cAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGa                                                                >  1:1065863/1‑140 (MQ=255)

                                                                             tCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGAcc                                                          <  1:1278847/140‑1 (MQ=255)

                                                                             tCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGAcc                                                          <  1:185679/140‑1 (MQ=255)

                                                                                cTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGc                                                       <  2:607362/140‑1 (MQ=255)

                                                                                    gCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGcc                                                   >  2:1525217/1‑140 (MQ=255)

                                                                                      ccTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGCCCACACCAGTAACCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCAt                                                 <  2:142848/140‑1 (MQ=255)

                                                                                      ccTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCAt                                                 <  1:135958/140‑1 (MQ=255)

                                                                                        tGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGAAAAAATCCCCCAGCGACCACCCCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATaa                                               <  2:1482365/140‑1 (MQ=255)

                                                                                               caacGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAg                                        >  1:337789/1‑140 (MQ=255)

                                                                                               caacGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAg                                        >  2:662295/1‑140 (MQ=255)

                                                                                                  cGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAggcg                                     >  1:1350337/1‑140 (MQ=255)

                                                                                                    ggtttttCCCTTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACCCCAGTAACCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAggcggc                                   <  2:1550255/137‑1 (MQ=255)

                                                                                                    ggATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAggcgcc                                   >  1:260528/1‑138 (MQ=255)

                                                                                                      aTTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGCCCCCACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcga                                 <  2:1273659/140‑1 (MQ=255)

                                                                                                      aTTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcga                                 <  1:1298083/140‑1 (MQ=255)

                                                                                                      aTTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcga                                 <  1:541106/140‑1 (MQ=255)

                                                                                                      aTTTTGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcga                                 <  1:856777/140‑1 (MQ=255)

                                                                                                      aTTTTCCCCTTTCCCCCAGAGGTGGTTGACAAAATCCCCAAGCGGCCACACCAGTAACACCAGCGCCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcga                                 <  2:1022716/140‑1 (MQ=255)

                                                                                                       ttttGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcgac                                >  2:1085019/1‑140 (MQ=255)

                                                                                                        tttGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcgacg                               <  1:548852/140‑1 (MQ=255)

                                                                                                         ttGCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGcgacga                              <  2:19694/140‑1 (MQ=255)

                                                                                                           gCCCTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGACCACCCCAGTAACCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAac                            <  2:918602/140‑1 (MQ=255)

                                                                                                           ccccTTTCCGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAac                            <  2:126567/139‑1 (MQ=255)

                                                                                                             ccTTTACGCCAGACGATGCTGACAAAATCCCCCAGCGCCCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAacac                          <  1:1075964/140‑1 (MQ=255)

                                                                                                             ccTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAacac                          <  1:1519618/140‑1 (MQ=255)

                                                                                                             ccTTTACGCCAGACGATGCTGACAAAAT‑CCCCAGCGACCACCCCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAAcaca                         <  2:1265346/140‑1 (MQ=255)

                                                                                                                  aCGCCAGACGATGCTGACAAAATCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACa                     <  1:836802/140‑1 (MQ=255)

                                                                                                                    gCCAGACGATGCTGACAAAATCCCCCAGCGCCCACACCAGTACCCCCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGc                   <  2:1489709/140‑1 (MQ=255)

                                                                                                                         aCGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGc              >  1:535501/1‑140 (MQ=255)

                                                                                                                         aCGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGc              >  2:242258/1‑140 (MQ=255)

                                                                                                                         aCGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCGGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGc              >  1:1152361/1‑140 (MQ=255)

                                                                                                                             tGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAAcc          >  1:1484418/1‑140 (MQ=255)

                                                                                                                              gCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCa         >  1:1280094/1‑140 (MQ=255)

                                                                                                                                    aaaaTCCCCCAGCGCCCACCCCAGAAACCCCAGCCCCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAg   <  2:384940/140‑1 (MQ=255)

                                                                                                                                    aaaaTCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAg   <  1:790142/140‑1 (MQ=255)

                                                                                                                                    aaaaTCCCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAg   <  1:357698/140‑1 (MQ=255)

                                                                                                                                    aaaaTACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAg   <  1:219893/140‑1 (MQ=255)

                                                                                                                                    aaaaTACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAg   <  1:882198/140‑1 (MQ=255)

                                                                                                                                     aaaTACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAGc  >  2:582991/1‑140 (MQ=255)

GCTAATGCGCATACTGTCCAGCACCGGCGAATTAAGAAGCACCAGTATCACCAACACCAATAACGAAACCGCAAGGTTCACTTTGCCCTGAAGAACAACGGGATTTTGCCCTTTACGCCAGACGATGCTGACAAAATACCCCAGCGACCACACCAGTAACACCAGCACCGCCAGCACGCCCTGCAAGCGGTCGACAGTCCAGCCGTACTGAGCGACCCGCAGCCATAACGCCCAGGCGGCGACGAACACATACAGCGGAGCAACCAGCAAAGC  >  NC_000913/3531303‑3531575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`