| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,564,951 | (A)5→4 | coding (429/810 nt) | yffS → | CPZ‑55 prophage; uncharacterized protein YffS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,564,947 | 0 | A | . | 99.2% | 519.3 / ‑0.5 | 125 | coding (425/810 nt) | yffS | CPZ‑55 prophage; uncharacterized protein YffS |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base . (63/60); total (65/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
ACCGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGAAAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGGGCGGCGA > NC_000913/2564809‑2565082 | aCCGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaa < 2:2194386/140‑1 (MQ=255) ccGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaa > 2:104249/1‑140 (MQ=255) ccGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaa < 1:2402339/140‑1 (MQ=255) ccGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaa > 2:1899334/1‑140 (MQ=255) cGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaa > 1:650521/1‑140 (MQ=255) cGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaa > 1:1580317/1‑140 (MQ=255) cGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaa > 1:1671215/1‑140 (MQ=255) gTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaag > 1:1277649/1‑139 (MQ=255) gTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaag > 2:1295649/1‑139 (MQ=255) gTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaag > 1:380288/1‑139 (MQ=255) gTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaag > 2:1467367/1‑139 (MQ=255) gTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGaaaag > 1:2554939/1‑139 (MQ=255) gaAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGgaa < 2:1317501/140‑1 (MQ=255) tGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGgaaga > 2:645162/1‑138 (MQ=255) tGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGgaaga < 1:645162/138‑1 (MQ=255) tGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGG‑GGAAAAGTGGaagaag > 1:1971433/1‑140 (MQ=255) aaTTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTgg < 2:539077/140‑1 (MQ=255) aCGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGgcagc > 1:1351062/1‑140 (MQ=255) gcgAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGgc < 2:2147269/135‑1 (MQ=255) gcgAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGgc > 1:2147269/1‑135 (MQ=255) cgAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCaga > 2:2125518/1‑140 (MQ=255) cgAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGG‑GGAAAAGTGGAAGAAGTGGCAGCaga > 2:1809247/1‑140 (MQ=255) aGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGgc > 2:1568412/1‑132 (MQ=255) aGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGgc < 1:1568412/132‑1 (MQ=255) aGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGc > 1:2052217/1‑140 (MQ=255) aGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGc < 2:1157548/140‑1 (MQ=255) gCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGccc < 1:749682/140‑1 (MQ=255) tGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCaa < 1:7902/140‑1 (MQ=255) tGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCaa < 1:1401003/140‑1 (MQ=255) tGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCaa < 1:1996262/140‑1 (MQ=255) gAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAAc > 1:1511594/1‑140 (MQ=255) aaCGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACg > 1:2223227/1‑140 (MQ=255) aaCGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGT‑AAAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACg > 1:861735/1‑140 (MQ=255) agaTGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGa > 2:388821/1‑140 (MQ=255) agaTGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGa > 2:1903532/1‑140 (MQ=255) aTGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGaaa < 1:2303789/140‑1 (MQ=255) cTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAag < 2:380288/140‑1 (MQ=255) tattatCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAaga > 2:608539/1‑140 (MQ=255) tatCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGAt < 1:2550544/140‑1 (MQ=255) tatCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGAt < 1:2084120/140‑1 (MQ=255) gacgacCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGa > 1:1219299/1‑140 (MQ=255) acgacCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAg > 1:177397/1‑140 (MQ=255) cgacCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGc < 1:1377829/140‑1 (MQ=255) gacCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCt < 2:76531/140‑1 (MQ=255) ccTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTaa > 2:560598/1‑140 (MQ=255) gAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGa < 1:1899334/140‑1 (MQ=255) gAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGa < 2:1978752/140‑1 (MQ=255) gAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGa < 2:1614579/140‑1 (MQ=255) gAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGa < 1:1144909/140‑1 (MQ=255) aaGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGATGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAg < 1:734339/140‑1 (MQ=255) ccGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGt < 2:1351062/140‑1 (MQ=255) gTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGa < 1:2431211/132‑1 (MQ=255) gTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTa > 2:445535/1‑140 (MQ=255) gTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTAGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTa > 1:432840/1‑140 (MQ=255) cGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaaccc < 2:2167549/140‑1 (MQ=255) cTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaacccga < 2:2308953/140‑1 (MQ=255) tGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaacccgaa > 2:2570480/1‑140 (MQ=255) tGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaacccgaa > 2:2513131/1‑140 (MQ=255) gAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaacccgaac > 2:1016811/1‑140 (MQ=255) cTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTaacccgaacccg > 2:1745084/1‑140 (MQ=255) gAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGaaa > 2:1272949/1‑140 (MQ=255) gAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGaaa > 1:512961/1‑140 (MQ=255) gAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGaaa > 2:566350/1‑140 (MQ=255) aGGCGGCACTAGCAAATAAACAAGTCCCAGCAGATGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGaaaa > 1:488801/1‑140 (MQ=255) aGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGaaaa > 2:2117751/1‑140 (MQ=255) cACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACa > 2:2271026/1‑140 (MQ=255) tAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCg < 1:1764929/140‑1 (MQ=255) tAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCg < 2:2554939/140‑1 (MQ=255) tAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCg < 1:2208332/140‑1 (MQ=255) aaaTAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCGACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCgg < 1:1001497/140‑1 (MQ=255) aaaTAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCgg < 1:496222/140‑1 (MQ=255) aaTAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGc < 1:1745084/140‑1 (MQ=255) tAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAt < 1:1552265/140‑1 (MQ=255) tAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAt > 2:2434364/1‑140 (MQ=255) tAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGAGGAAGAAGCGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGCGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAt > 1:1479009/1‑140 (MQ=255) aaaCAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAtg < 2:1971433/140‑1 (MQ=255) aaGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAtgttgt > 1:454592/1‑140 (MQ=255) aaGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAtgttgt > 2:651334/1‑140 (MQ=255) aaGTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAACTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCAtgttgt > 2:2388775/1‑140 (MQ=255) gTCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTgtgt > 2:1873027/1‑140 (MQ=255) tCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTc > 2:1720077/1‑140 (MQ=255) tCCCAGCAGAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTc > 1:584511/1‑140 (MQ=255) agcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGt > 2:1803090/1‑140 (MQ=255) agcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGt < 1:388821/140‑1 (MQ=255) agcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGt < 2:738629/140‑1 (MQ=255) agcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGt < 1:445535/140‑1 (MQ=255) gcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTa < 1:541393/140‑1 (MQ=255) gcagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTa > 1:46408/1‑140 (MQ=255) cagAAGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTAc < 1:2065516/140‑1 (MQ=255) aaGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTgg > 2:1723961/1‑140 (MQ=255) aaGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTgg > 1:145493/1‑140 (MQ=255) aaGCGGAAGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTgg > 2:1490823/1‑140 (MQ=255) aaGAGATGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCaa > 2:153045/1‑140 (MQ=255) gaTGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATggg < 1:2152509/140‑1 (MQ=255) gaTGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATggg < 2:451476/140‑1 (MQ=255) gaTGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATggg < 2:1511594/140‑1 (MQ=255) tGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTgg < 2:265074/128‑1 (MQ=255) tGGGAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTgg > 1:265074/1‑128 (MQ=255) ggAGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGggcggc > 2:1159800/1‑140 (MQ=255) aGGTG‑AAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGGGCGGCGa > 1:2573363/1‑140 (MQ=255) | ACCGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGAAAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGGGCGGCGA > NC_000913/2564809‑2565082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |