Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913501,5640AC26.9% 159.0 / 32.6 78*559E (TAA→GAA) ybaLputative transporter YbaL
Reads supporting (aligned to +/- strand):  ref base A (52/5);  new base C (0/21);  total (52/26)
Fisher's exact test for biased strand distribution p-value = 1.20e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

GTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGG  >  NC_000913/501425‑501701
                                                                                                                                            |                                                                                                                                         
gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTa                                                                                                                                           >  1:2539983/1‑140 (MQ=255)
 ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTAc                                                                                                                                          <  1:2469049/140‑1 (MQ=255)
  tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTAcc                                                                                                                                         <  1:513674/140‑1 (MQ=255)
       tATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTc                                                                                                                                    <  2:2053549/140‑1 (MQ=255)
        aTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTca                                                                                                                                   >  1:2118362/1‑140 (MQ=255)
        aTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTca                                                                                                                                   >  2:1087972/1‑140 (MQ=255)
          cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTcacc                                                                                                                                 >  2:1717648/1‑140 (MQ=255)
          cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTcacc                                                                                                                                 >  2:873737/1‑140 (MQ=255)
           gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTcacca                                                                                                                                >  1:1210640/1‑140 (MQ=255)
            tcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTcaccac                                                                                                                               >  1:1894972/1‑140 (MQ=255)
                ttCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCa                                                                                                                           >  2:1146952/1‑140 (MQ=255)
                ttCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCa                                                                                                                           >  2:451640/1‑140 (MQ=255)
                     gggCCAGATAGGGCTTTCCCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATATTTTACACCCGGCACCCCCCGTTTCCCCCGTCACCCCCTCACccgc                                                                                                                      <  2:2066669/139‑1 (MQ=25)
                     gggCCAGATAGGGCGTTCACGCCGCATCTGGCTTTTGCCTCTCGATGCCTGATGCGACGCGGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATTTTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCACCTCCCccgc                                                                                                                      <  2:14010/139‑1 (MQ=25)
                            aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGc                                                                                                               >  1:121298/1‑140 (MQ=255)
                               aGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGtt                                                                                                            >  2:2232638/1‑140 (MQ=255)
                                 gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTc                                                                                                          >  1:2329751/1‑140 (MQ=255)
                                 gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTc                                                                                                          >  1:892176/1‑140 (MQ=255)
                                      cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCcagca                                                                                                     >  1:245832/1‑140 (MQ=255)
                                       ccgccgcATTTGGCTTTTGGCTCTCGATGCCTGATGCGCCGCGGGGGCGTCTTCTCATCCCTACATTTTTTTC‑ATTTTTAACACCCGCCACCCCCCGTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCcagcag                                                                                                    <  2:154132/139‑1 (MQ=255)
                                       aCGCCCCATCTGGCTTTTGGCTCTCGAGGCCTGATGCGACGCTGGCGCTTTTTATCATGCCTACATTTTTTTC‑ATATTTTACATCCGGCAACCCCCTTTTCCCCCGTCCCCCCCTCACCCGCCGGTGGCGTTTCcagcag                                                                                                    <  2:496239/140‑1 (MQ=255)
                                         cccgcATCTGGCTTTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTTTTATCATGCCTACATTTTTTTC‑ATATTTTACACCCGGCAACCCCCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGtt                                                                                                  <  2:1807768/139‑1 (MQ=38)
                                         cccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACACCCGGCAACCACCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGtt                                                                                                  <  1:500930/139‑1 (MQ=38)
                                           cgcTTCTGGCTTTTGGCTCTCGATGCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATTTTTTACATCCGGCACCCCCCTTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                                <  2:2329751/140‑1 (MQ=37)
                                           cgcATCTGGCTTTTGGCTCTCGATGCCTGATGCGACGCGGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATTTTTTACACCCGGCAACCCCCTTTTCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                                <  2:806379/140‑1 (MQ=37)
                                           cgcATCTGGCTTTTGGCTCTCGATGCCTGATCGGCCGCGGGCGCGTCTTTTCACGCCT‑CATTTTTTTCAATTTTTTCCCTCGGGCAACCCCCGTTTACCCCGCCACCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                                <  2:1358429/140‑1 (MQ=255)
                                           cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                                >  1:78977/1‑140 (MQ=255)
                                             cATCTGGCTTTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATCCCTACATTTTTTTC‑ATTTTTTACACCCGCCACCCCCCTTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAg                                                                                              <  2:2069893/140‑1 (MQ=37)
                                               tCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCa                                                                                            >  2:798989/1‑140 (MQ=255)
                                                   gCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTCCCCCGCCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGt                                                                                        <  2:2088622/140‑1 (MQ=39)
                                                        tGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACggg                                                                                   >  1:1474652/1‑140 (MQ=255)
                                                           ctctCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGa                                                                                >  1:1955580/1‑140 (MQ=255)
                                                           ctctCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGa                                                                                >  1:1439708/1‑140 (MQ=255)
                                                             ctcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAtt                                                                              >  2:401943/1‑140 (MQ=255)
                                                             ctcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAtt                                                                              >  1:882917/1‑140 (MQ=255)
                                                                     cTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTc                                                                      >  1:2249928/1‑140 (MQ=255)
                                                                      taaggcgcCGCTGGCGGTTTTTATCATGCCTACATTTTTTTC‑ATTTTTTAAACCCGCCACCCCCCTTTTCCCCCGTCACCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg                                                                     <  2:2074413/136‑1 (MQ=255)
                                                                       tgggCGACGCTGGCCCGTTTTCTCCGGCCTCAATTTTTTTC‑ATTTTTTACCCCCGCCAACCCCCGTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc                                                                    <  2:1205782/137‑1 (MQ=255)
                                                                       gATGCGCCGCTGGCGCGTTTTATCATGCCTACTTTTTTTTC‑ATTTTTTACACCCGGCAACCCCCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc                                                                    <  2:896546/140‑1 (MQ=255)
                                                                        aTGCGACGCTGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATATTTTACATCCGGCAACCCCCTTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGcc                                                                   <  1:49146/140‑1 (MQ=255)
                                                                          gCGACGCTGGCGCGTCTTATCATGCCTACATTTTTTTC‑ATATTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCa                                                                 <  1:873737/140‑1 (MQ=255)
                                                                            gccgcgGGCGCGTTTTATCATCCCTACTTTTTTTTA‑ATATTTTACACCCGGCACCCCCCTTTTCCCCCGCCACCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATc                                                               <  2:1747529/138‑1 (MQ=255)
                                                                             aCGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCa                                                              >  2:866405/1‑140 (MQ=255)
                                                                               gcgggCGCGTTTTATCATGCCTACATTTTTTTA‑ATTTTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACt                                                            <  2:1528728/137‑1 (MQ=255)
                                                                                 gggCGCGTTTTATCATCCCTACATATTTTTC‑ATTTTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAc                                                          <  2:1474652/139‑1 (MQ=255)
                                                                                  ggCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAcc                                                         >  1:1329006/1‑140 (MQ=255)
                                                                                   gcgcGTCTTATCATCCCTACTTTTTTTTC‑ATTTTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCt                                                        <  2:2004739/140‑1 (MQ=255)
                                                                                     gcgTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGa                                                      >  1:2306818/1‑140 (MQ=255)
                                                                                        tCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTc                                                   >  1:143698/1‑140 (MQ=255)
                                                                                        tCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTc                                                   >  1:54440/1‑140 (MQ=255)
                                                                                           taccATGCCTACTTTTTTTTC‑ATTTTTTCCACCCGGCACCCCCCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca                                                <  2:1454963/137‑1 (MQ=255)
                                                                                            ttCATGCCTACATTTTTCTA‑ATATTCTACACCCGGCACCCCCTGTTTACCCCGACCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcac                                               <  2:2249928/139‑1 (MQ=255)
                                                                                            ttCATCCCTACATTTTTTTC‑ATTTTTTACACCGGGCACCCACCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcac                                               <  2:897161/139‑1 (MQ=255)
                                                                                             tCATGCCTACTTTTTTTTT‑ATATTTTACAGCCGGCAACCCCCTTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc                                              <  2:602433/140‑1 (MQ=255)
                                                                                               aTGCCTACATATTTTTC‑ATATTTTACATCCGGCACCCCCCGTTTCCCCCGCCACCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACC‑GATTCGCACCACg                                           <  1:798989/140‑1 (MQ=255)
                                                                                                tcccTACATTTTTTTC‑ATATTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                           <  2:892176/138‑1 (MQ=255)
                                                                                                tGCCTACTTTTTTTTT‑TTTTTTTACACCCGCCAACCCCCGTTTCCCCCGCCCCCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                           <  2:2539983/140‑1 (MQ=255)
                                                                                                tGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                           <  1:1649221/140‑1 (MQ=255)
                                                                                                tGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCACCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                           <  1:167668/140‑1 (MQ=255)
                                                                                                cgCCTACTTTTTTTTC‑ATATTTTACCCCCGCCACCCCCCTTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATTGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                           <  1:603735/139‑1 (MQ=255)
                                                                                                  ccTACATTTTTTTC‑ATATTTTCCACCCGGCACCCACCTTTTCCCCCGCCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt                                         <  2:245832/140‑1 (MQ=255)
                                                                                                  ccTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt                                         >  1:1835115/1‑140 (MQ=255)
                                                                                                  ccTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt                                         >  1:770922/1‑140 (MQ=255)
                                                                                                   cTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTc                                        >  1:792496/1‑140 (MQ=255)
                                                                                                    tACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCg                                       >  1:1317626/1‑140 (MQ=255)
                                                                                                     aCATTTTTTTC‑ATTTTTTACACCCGGCACCCCCCTTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                      <  1:1883075/140‑1 (MQ=255)
                                                                                                     aCATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                      >  1:1808680/1‑140 (MQ=255)
                                                                                                       atttttttC‑ATATTTTCCACCCGGCAACCACCGTTTCCCCCGTCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTg                                    <  1:2068154/137‑1 (MQ=255)
                                                                                                       atatTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCA‑GGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGa                                   >  1:1290384/1‑140 (MQ=255)
                                                                                                           ttttC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat                                >  1:2456054/1‑140 (MQ=255)
                                                                                                           ttttC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGAGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTCCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat                                >  1:2569815/1‑140 (MQ=255)
                                                                                                              tC‑ATTTTTTACCCCCGCCACCCCCCTTTCCCCCCGCCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACg                             <  2:1283414/140‑1 (MQ=255)
                                                                                                                 atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc                           >  1:1327155/1‑140 (MQ=255)
                                                                                                                 atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc                           >  2:1855844/1‑140 (MQ=255)
                                                                                                                 atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc                           >  2:1559818/1‑140 (MQ=255)
                                                                                                                 atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGACGGTGGCGTTTCCAGCAGTTCTAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc                           <  1:1717648/140‑1 (MQ=255)
                                                                                                                    ttttACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACt                        >  1:1477697/1‑140 (MQ=255)
                                                                                                                      ttACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCATGTTCGGTGATATACGCCACTTc                      >  2:1681079/1‑140 (MQ=255)
                                                                                                                       tccacccGCCACCCCCCGTTCCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa                     <  2:837203/135‑1 (MQ=255)
                                                                                                                       tACACCCGCCAACCCCCTTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa                     <  2:2154209/140‑1 (MQ=255)
                                                                                                                        ccATCCGGCACCCCCCGTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCATTTCAt                    <  2:379272/139‑1 (MQ=255)
                                                                                                                        ccATCCGGCAACCCCCGTTTCCCCCGTCACCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCAt                    <  1:1102642/139‑1 (MQ=255)
                                                                                                                        acacCCGGCACCCCCCTTTTCCCCCGTCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCAt                    <  2:2306818/140‑1 (MQ=255)
                                                                                                                         cATCCGGCAACCACCTTTTCCCCCGTCACCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATc                   <  1:1020436/140‑1 (MQ=255)
                                                                                                                          acccGGCAACCCCCTTTTCCCCCGCCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCg                  <  1:486080/138‑1 (MQ=255)
                                                                                                                           cccGCCACCCCCCGTTTCCCCCGTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt                 <  2:2103624/139‑1 (MQ=255)
                                                                                                                            ccGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTc                >  1:927239/1‑140 (MQ=255)
                                                                                                                              ggCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCAt              >  2:1841983/1‑140 (MQ=255)
                                                                                                                               gCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa             >  1:1530676/1‑140 (MQ=255)
                                                                                                                               gCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa             >  1:2455671/1‑140 (MQ=255)
                                                                                                                                cacccaccTTTTCCCCCGTCCCCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGGATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATaa            <  2:2496186/137‑1 (MQ=255)
                                                                                                                                cacccaccTTTTCCCCCGCCCCCCCCCCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATaa            <  2:106586/137‑1 (MQ=255)
                                                                                                                                   ccaccGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATgg         >  2:955985/1‑140 (MQ=255)
                                                                                                                                      ccttttCCCCCGCCCCCCCCCCGCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcg      <  2:1835115/137‑1 (MQ=255)
                                                                                                                                      ccGTTTCCCCCGTCACCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcg      <  1:996302/140‑1 (MQ=255)
                                                                                                                                       cttttCCCCCCTCCCCCCCTCCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc     <  2:54440/138‑1 (MQ=255)
                                                                                                                                       cGTTTCCCCCGTCCCCCCCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGACTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc     <  2:121298/140‑1 (MQ=255)
                                                                                                                                         tttACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCgg   >  1:764767/1‑140 (MQ=255)
                                                                                                                                          ttACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCggg  >  1:1904848/1‑140 (MQ=255)
                                                                                                                                          ttACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCggg  >  1:1692508/1‑140 (MQ=255)
                                                                                                                                            |                                                                                                                                         
GTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTC‑ATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGG  >  NC_000913/501425‑501701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑