| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,504,535 | G→A | V162I (GTC→ATC) | frlR → | putative DNA‑binding transcriptional regulator FrlR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,535 | 0 | G | A | 99.3% | 520.6 / ‑4.6 | 148 | V162I (GTC→ATC) | frlR | putative DNA‑binding transcriptional regulator FrlR |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (79/67); total (81/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.62e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
GCGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACGTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGAACCG > NC_000913/3504401‑3504669 | ttgAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaa < 2:2679831/138‑1 (MQ=255)gCGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaa < 2:1921702/140‑1 (MQ=255) cGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaag > 2:2576038/1‑140 (MQ=255) cGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaag < 1:1559754/140‑1 (MQ=255) gAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACAACgaagg < 1:2004725/140‑1 (MQ=255) aaaaGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaagga < 2:808562/140‑1 (MQ=255) aaGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCgaaggaag < 1:999128/140‑1 (MQ=255) aGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGc < 1:1241823/140‑1 (MQ=255) aGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGc > 1:1841953/1‑140 (MQ=255) gCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCt < 2:2378055/140‑1 (MQ=255) gCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCt < 1:2569170/140‑1 (MQ=255) cTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTc < 1:1149199/140‑1 (MQ=255) cTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTc < 2:1070723/140‑1 (MQ=255) cTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTc < 2:752564/140‑1 (MQ=255) cTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTc < 1:2129892/140‑1 (MQ=255) tGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTcc < 2:287262/140‑1 (MQ=255) aaCATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCAc > 2:2409823/1‑140 (MQ=255) aTCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTa < 2:1946925/140‑1 (MQ=255) ccccGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATc > 1:1656223/1‑140 (MQ=255) ccccGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATc > 2:1320312/1‑140 (MQ=255) cccGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCa < 1:426050/140‑1 (MQ=255) ccGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAg > 2:2041381/1‑140 (MQ=255) cGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGt < 2:653757/140‑1 (MQ=255) cGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGt < 1:50938/140‑1 (MQ=255) cGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGt < 2:1715831/140‑1 (MQ=255) cGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGt < 2:1525086/140‑1 (MQ=255) cGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGt < 1:2226745/140‑1 (MQ=255) aCAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTTGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTAttt > 1:1769473/1‑140 (MQ=255) aCAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTAttt < 1:1931264/140‑1 (MQ=255) aCAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTAttt < 1:1507837/140‑1 (MQ=255) aGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCa > 1:2442874/1‑140 (MQ=255) cGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAgg < 2:2096578/140‑1 (MQ=255) gAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGa < 1:800589/140‑1 (MQ=255) gAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGa < 1:1870153/140‑1 (MQ=255) gAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGa < 1:2670731/140‑1 (MQ=255) cATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGa < 2:1699171/140‑1 (MQ=255) tctcTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGaca < 1:942190/140‑1 (MQ=255) tctcTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGaca < 1:2409823/140‑1 (MQ=255) ctGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACAcgc > 2:1413572/1‑140 (MQ=255) ctGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACAcgc > 1:2073796/1‑140 (MQ=255) ctGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACAcgc > 1:2402223/1‑140 (MQ=255) gCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGa < 2:4954/140‑1 (MQ=255) gCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGa > 1:1586008/1‑140 (MQ=255) ccGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAg > 1:326727/1‑140 (MQ=255) ccGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAg > 1:819258/1‑140 (MQ=255) ggTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTgg > 2:1300925/1‑140 (MQ=255) tctcGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACa > 1:2461242/1‑140 (MQ=255) ctcGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACaa > 2:2521440/1‑140 (MQ=255) cGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACaaaa > 2:1400712/1‑140 (MQ=255) aTAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAg > 2:1223155/1‑140 (MQ=255) aTAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAg > 2:639230/1‑140 (MQ=255) aTAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAg > 1:1048987/1‑140 (MQ=255) tAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGa < 1:1351884/140‑1 (MQ=255) tAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGa < 1:1320312/140‑1 (MQ=255) aaGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGAcc > 2:1824899/1‑140 (MQ=255) aaGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGAcc < 1:323407/140‑1 (MQ=255) agCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATc > 2:387171/1‑140 (MQ=255) gCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGata > 1:1290806/1‑140 (MQ=255) ttATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCttt > 1:867996/1‑140 (MQ=255) aTAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACTTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTgccgcc > 1:128507/1‑140 (MQ=255) aTAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGCTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTgccgcc > 1:1958937/1‑140 (MQ=255) gctCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 2:733581/3‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 1:283613/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 1:2609592/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 2:1458451/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 1:1551748/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 2:1990117/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 1:727624/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 1:1687131/1‑140 (MQ=255) gTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcc > 2:562305/1‑140 (MQ=255) ttCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACTTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAccc > 2:1244980/1‑140 (MQ=255) cATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcccgc > 2:1233076/1‑140 (MQ=255) tGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACGTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcccgccc > 2:918393/1‑140 (MQ=255) tGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcccgccc < 1:1437881/140‑1 (MQ=255) ggATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCAcccgcccg > 1:199350/1‑140 (MQ=255) aTCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTATGCCGCCACCCGCCCGCa < 1:19589/140‑1 (MQ=255) tCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAg > 1:2615741/1‑140 (MQ=255) ccGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGc > 2:5751/1‑140 (MQ=255) ccGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGc > 2:947588/1‑140 (MQ=255) ccGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGc > 1:65267/1‑140 (MQ=255) ccGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGc > 1:678297/1‑140 (MQ=255) ccGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGc > 1:894293/1‑140 (MQ=255) cGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCa > 1:1634021/1‑140 (MQ=255) cGCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGAAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCa > 1:178936/1‑140 (MQ=255) gCTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCaa < 1:2521440/140‑1 (MQ=255) cTGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCaaa > 2:2112018/1‑140 (MQ=255) tGTCGCGTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCaaaa < 2:1881641/140‑1 (MQ=255) cgcgTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATgg > 2:344350/1‑140 (MQ=255) cgTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCt < 2:1048987/140‑1 (MQ=255) cgTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCt < 2:1551748/140‑1 (MQ=255) cgTTATCCTGACTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCt < 2:1841953/140‑1 (MQ=255) aCTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGaa > 2:1476679/1‑140 (MQ=255) cTTTGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAAc > 1:2385006/1‑140 (MQ=255) tttGATGAGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACt > 2:2246987/1‑140 (MQ=255) tgatgaGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTgg < 2:1769473/140‑1 (MQ=255) gatgaGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTggg > 1:574349/1‑140 (MQ=255) gatgaGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTggg > 2:856728/1‑140 (MQ=255) gatgaGATTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTggg > 2:2233695/1‑140 (MQ=255) gagaTTTACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGa < 1:1904358/140‑1 (MQ=255) tttACATCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGAACCg > 2:414230/1‑140 (MQ=255) | GCGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACGTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGAACCG > NC_000913/3504401‑3504669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |