New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3220520 =	106 (1.010)	9 (0.090)	8/410	6.9	8.5%	coding (1027/1380 nt)	patA	putrescine aminotransferase
	?	NC_000913	3220730 =	92 (0.920)					coding (1237/1380 nt)	patA	putrescine aminotransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGTTTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3220767‑3220520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgcGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCAC  >  NC_000913/3220730‑3220965                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCGTTTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTC                                                                                                                                                                                                                                                      >  2:864323/1‑240  TCGTTTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCTGGTAAGTTCTGCTCCAGCAACACATTGATGGTCG                                                                                                                                                                                                                                                     <  2:692931/240‑1     TTTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCC                                                                                                                                                                                                                                                   <  2:402088/239‑1      TTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAG                                                                                                                                                                                                                                                 <  1:495838/240‑1                        TCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGA                                                                                                                                                                                                                               <  1:242413/240‑1                                                                       AGCCTATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGC                                                                                                                                                                                                                                              <  2:9771/178‑1                                                                            ATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCA                                                                                                                                                                           <  1:660827/240‑1                                                                                                                CCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAG                                                                                                                                                                                                                                                 <  1:107504/134‑1                                                                                                                CCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAG                                                                                                                                                                                                                                                 >  2:107504/1‑134                                                                                                                         CGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGG                                                                                                                                    >  1:464711/1‑234                                                                                                                                             GGGATATTCCCGCGCCAGTTGACGGAAACCGCCCAGCACCATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGA                                                                                                                                                                                                                               <  2:811251/123‑1                                                                                                                                                         CGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAA                                                                                              >  2:500116/1‑240                                                                                                                                                                                                   CTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTAACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATC                                                             >  1:708671/1‑231                                                                                                                                                                                                                  TAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTAC                                      >  1:918474/1‑239                                                                                                                                                                                                                           CTCCAGCAACACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGC                            >  1:175458/1‑240                                                                                                                                                                                                                                     ACATTGATGGTCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGC                   >  1:576831/1‑239                                                                                                                                                                                                                                                      CGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCAC  >  2:829523/1‑239                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCGTTTTGGCGTTATTGAGCGTTCCGGCCACCAGTACGCGCTGGCGGAACATCTCGCTGGCAAAGTTATAGCCGATTTCGTTATCAACAAACTCAATCGCCATCAACATCCCTTTACCACGCGCTTCCTGTACCAGATCGGGATATTCCCGCGCCAGTTGACGGAAACCGTCCAGCAACATATCGCCTTTTTGCTCAGCCTGAGCCGGTAAGTTCTGCTCCAGCAACACATTGATGGTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3220767‑3220520 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgcGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCAC  >  NC_000913/3220730‑3220965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.