Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,453,869 A→G intergenic (‑227/‑58) paaZ ← / → paaA oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase/phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,453,8690AG100.0% 206.1 / NA 55intergenic (‑227/‑58)paaZ/paaAoxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase/phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (35/20);  total (35/20)

CTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGATCACTCGCGCACCAACCTTGC  >  NC_000913/1453645‑1454104
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           
cTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGAt                                                                                                                                                                                                                                    >  2:294474/1‑234 (MQ=255)
cTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCgtgt                                                                                                                                                                                                                              >  2:492738/1‑240 (MQ=255)
                 cacaTTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGa                                                                                                                                                                                                             >  1:407854/1‑240 (MQ=255)
                         tGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGGAAACTg                                                                                                                                                                                                       >  1:76734/1‑238 (MQ=255)
                                        aaTCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGtgat                                                                                                                                                                                       >  1:19726/1‑239 (MQ=255)
                                             cgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGt                                                                                                                                                                                  <  1:290072/239‑1 (MQ=255)
                                               aaTCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGa                                                                                                                                                                                >  2:618859/1‑239 (MQ=255)
                                                        aaGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAagaaga                                                                                                                                                                      <  1:188680/240‑1 (MQ=255)
                                                        aaGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAagaaga                                                                                                                                                                      <  1:667100/240‑1 (MQ=255)
                                                                    ttttAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCa                                                                                                                                                          <  1:400716/240‑1 (MQ=255)
                                                                         aCGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGa                                                                                                                                                     <  1:132777/240‑1 (MQ=255)
                                                                          cGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGa                                                                                                                                                             >  2:200889/1‑231 (MQ=255)
                                                                                       aTGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAAc                                                                                                                                        >  1:352773/1‑239 (MQ=255)
                                                                                               tGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCg                                                                                                                                <  2:168424/239‑1 (MQ=255)
                                                                                                   taGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAAGa                                                                                                                                           >  1:681264/1‑224 (MQ=255)
                                                                                                    aGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCca                                                                                                                           <  1:403274/239‑1 (MQ=255)
                                                                                                      cAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAg                                                                                                                        >  2:712378/1‑240 (MQ=255)
                                                                                                       aaCTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGa                                                                                                                                                                                <  2:146728/183‑1 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAGATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  2:675523/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCtt                                                                                                                                                                >  2:184645/1‑195 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATATCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  1:715994/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGa                                                                                                                                           >  2:374215/1‑216 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCt                                                                                                                                    >  1:688860/1‑223 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCg                                                                                                                                >  1:627921/1‑227 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCg                                                                                                                                <  2:627912/227‑1 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCca                                                                                                                           >  2:578476/1‑232 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCca                                                                                                                           >  2:273749/1‑232 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGAc                                                                                                                     >  1:515320/1‑238 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACt                                                                                                                    >  2:423456/1‑239 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  1:73305/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  1:442208/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  1:202672/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  2:520135/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTg                                                                                                                   >  1:661631/1‑240 (MQ=255)
                                                                                                           gCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTCTGAGCAACGGATAGCCCAGGAAACAGCTATCGAGCCACAGGACTg                                                                                                                   >  1:428281/1‑240 (MQ=255)
                                                                                                                        aTGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAg                                                                                                                              <  2:286866/216‑1 (MQ=255)
                                                                                                                                ataaataaTGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGaaa                                                                                              >  1:728629/1‑240 (MQ=255)
                                                                                                                                ataaataaTGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGaaa                                                                                              >  1:213148/1‑240 (MQ=255)
                                                                                                                                ataaataaTGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGaaa                                                                                              >  1:317213/1‑240 (MQ=255)
                                                                                                                                ataaataaTGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGaa                                                                                               <  1:699086/239‑1 (MQ=255)
                                                                                                                                ataaataaTGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGaa                                                                                               <  1:522002/239‑1 (MQ=255)
                                                                                                                                          aTTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTActg                                                                                                 >  1:194854/1‑225 (MQ=255)
                                                                                                                                          aTTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTg                                                                                       <  2:755326/237‑1 (MQ=255)
                                                                                                                                          aTTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGGAAAGGTGATGACGTGACCCAAGAAGAACGCATGGAGCTACGGATAGCCCAGGa                                                                                                                                           >  2:352769/1‑185 (MQ=255)
                                                                                                                                             tataAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGc                                                                                 >  1:544273/1‑240 (MQ=255)
                                                                                                                                                       gggTGCGACAGCCGTCACAGTTCAAACATATATAATTTATAATTTTACTTAACTATTGTGTAACTTTCATAACGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGt                                                                                                                                                                                  <  2:559544/133‑1 (MQ=255)
                                                                                                                                                        ggTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGAt                                                                                     <  2:734458/225‑1 (MQ=255)
                                                                                                                                                        ggTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGgc                                                                       <  2:468595/239‑1 (MQ=255)
                                                                                                                                                            cGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCAt                                                                  >  1:348051/1‑240 (MQ=255)
                                                                                                                                                                                   tACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTa                                            >  2:683562/1‑239 (MQ=255)
                                                                                                                                                                                   tACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTAt                                           >  1:542442/1‑240 (MQ=255)
                                                                                                                                                                                              tgATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCTACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGATTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGaa                                 <  2:317208/239‑1 (MQ=255)
                                                                                                                                                                                              tgATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGaa                                 <  1:499415/239‑1 (MQ=255)
                                                                                                                                                                                              tgATTTTACTTAACTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGaa                                 <  1:618868/239‑1 (MQ=255)
                                                                                                                                                                                                         aaCTATTGTGTAACTTTCATAAAGCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGAt                      <  2:63246/239‑1 (MQ=255)
                                                                                                                                                                                                                             aaagCAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGATCACTCGCGCACCAACCTTgc  <  1:572787/239‑1 (MQ=255)
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                           
CTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGATCACTCGCGCACCAACCTTGC  >  NC_000913/1453645‑1454104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: