| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BN000925 | = 44768 | 328 (1.060) | 3 (0.010) | 3/404 | 20.8 | 0.88% | coding (1276/2214 nt) | traE | TraE putative helicase |
| ? | BN000925 | = 44873 | 363 (1.230) | coding (1171/2214 nt) | traE | TraE putative helicase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BN000925/44524‑44768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacctgTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGGACCTG < BN000925/44873‑44640 ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGGGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGC > 1:433798/1‑238ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGC > 1:226325/1‑238ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGC > 1:286916/1‑238ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGC > 1:101594/1‑238 GCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG < 1:90333/238‑1 CGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGCCGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG > 2:229356/1‑237 CGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG > 1:245403/1‑237 CGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG > 2:173718/1‑237 CGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG > 1:616177/1‑237 GGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGA < 1:513050/237‑1 GGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTAGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACC > 1:230987/1‑238 GTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCT < 2:102282/238‑1 GGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCTGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGA > 2:8319/1‑193 GCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTA < 1:630685/237‑1 GGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCG < 2:470892/143‑1 CGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCG > 1:734227/1‑188 CGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCG < 2:734216/188‑1 GCCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGG < 1:465573/238‑1 GCCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAG < 1:372804/237‑1 CCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGG > 1:42681/1‑237 CCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGG > 1:136883/1‑237 CCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAG > 2:203491/1‑236 CCGACCTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTG > 2:761891/1‑169 CTGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGGACCTG > 2:530721/1‑237 TGTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGt > 2:38975/1‑110 GTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGA < 1:192604/167‑1 ACGCGGGTAAGGTCCGACAGCAGAGATTCCATCGTGTACAGCGGCTGCGGTTTCGTCTCCTGCTGCTCGGCCTTCGCATCGGTGCAGGTGCCGGCCTGGCCGTCACGCAGCTTGCGCAGGTCCTGTTCAATGTCGTCGGCATTGCCTTCCAGGTCCTCGTTGCCGGCGTCGTTCTTGTAGAGAATCTTCCAGCCCGGCGACGTGGTGACGTTCGAGCGCACGCCGAAACGATGATCGCCGACCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BN000925/44524‑44768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacctgTCGAAGCTCACCGATGCCGAGCAGAAGATTTACCTGCTGATCGCGCGCGCCTACGTCGCGCAGTTCTGGCCGAAGCATCTGTATGACCAGACCGACGTGCTTGCCCAGGTCGGCGATCATCGTTTCGGCGTGCGCTCGAACGTCACCACGTCGCCGGGCTGGAAGATTCTCTACAAGAACGACGCCGGCAACGAGGACCTGGAAGGCAATGCCGACGACATTGAACAGGACCTG < BN000925/44873‑44640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |