| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,523,716 | T→C | T127A (ACG→GCG) | yjhG ← | KpLE2 phage‑like element; D‑xylonate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,523,716 | 0 | T | C | 100.0% | 324.2 / NA | 84 | T127A (ACG→GCG) | yjhG | KpLE2 phage‑like element; D‑xylonate dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/48); total (36/48) | |||||||||||
GCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGTTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCATTCA > NC_000913/4523498‑4523952 | gCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGt > 1:904655/1‑239 (MQ=255) gTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAgg > 1:973119/1‑240 (MQ=255) gTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAgg > 1:96977/1‑240 (MQ=255) ttctCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAt > 1:866544/1‑239 (MQ=255) ccATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGgag < 2:222684/240‑1 (MQ=255) ccTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCg < 2:527424/233‑1 (MQ=255) ttGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 1:876200/240‑1 (MQ=255) ttGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 2:962226/240‑1 (MQ=255) ttGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 1:280983/240‑1 (MQ=255) tGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGa > 2:326879/1‑208 (MQ=255) gCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 2:34457/238‑1 (MQ=255) ggCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCa < 1:452050/240‑1 (MQ=255) cAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATa > 1:571363/1‑240 (MQ=255) aGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATa > 1:620818/1‑239 (MQ=255) gCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATagg < 1:523420/240‑1 (MQ=255) gtggcgcCGCCGGGGACCAGAACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGAc < 2:247099/221‑1 (MQ=255) cgcgCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCg < 1:67936/217‑1 (MQ=255) cgcgCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 2:381323/227‑1 (MQ=255) gcgcCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTaca < 2:206947/226‑1 (MQ=255) ggTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATgg < 1:204756/226‑1 (MQ=255) cGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCgg > 1:785594/1‑240 (MQ=255) ttgtGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGgccgcc > 2:166113/1‑240 (MQ=255) cgcgGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCAt > 1:516268/1‑240 (MQ=255) cggcgAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATagggc > 2:629679/1‑197 (MQ=255) cggcgAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATc > 1:511493/1‑239 (MQ=255) ggcgAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGgag < 1:128654/178‑1 (MQ=255) cgAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTgg > 1:273490/1‑239 (MQ=255) atcatGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTgg < 2:594059/199‑1 (MQ=255) cccTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGc < 2:972064/240‑1 (MQ=255) aaCTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCt < 2:985659/194‑1 (MQ=255) aCTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAgcgc > 1:211791/1‑240 (MQ=255) aCTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAgcgc < 1:93007/240‑1 (MQ=255) cGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCa < 1:1065325/239‑1 (MQ=255) cacaCCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAACGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTc > 2:895845/1‑177 (MQ=255) acCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGttt > 1:725397/1‑240 (MQ=255) tAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCTCGTcaca > 2:444531/1‑115 (MQ=255) cTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTgcgc > 1:858192/1‑240 (MQ=255) tttCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGcgcc > 2:59007/1‑240 (MQ=255) tttCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGcgcc > 1:828886/1‑240 (MQ=255) cgcgTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGc < 2:715928/205‑1 (MQ=255) cgTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGt < 1:543172/239‑1 (MQ=255) cgTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCACCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGt < 2:672790/239‑1 (MQ=255) tCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAg < 1:82259/240‑1 (MQ=255) gggCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGcc < 1:5165/240‑1 (MQ=255) gggCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGcc < 2:829985/240‑1 (MQ=255) gagCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTgg < 2:93071/165‑1 (MQ=255) cGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCAcc < 2:132818/233‑1 (MQ=255) aagaaGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCAc < 2:769348/227‑1 (MQ=255) aaTAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGtt > 2:329222/1‑126 (MQ=255) aaTAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTAc > 1:373097/1‑239 (MQ=255) aaTAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTAc > 2:383708/1‑239 (MQ=255) aTAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTg < 1:882603/240‑1 (MQ=255) tAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTg < 1:823075/239‑1 (MQ=255) aaGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAg < 1:777503/240‑1 (MQ=255) aaGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAg < 2:725395/240‑1 (MQ=255) aGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCCGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGc > 2:614241/1‑240 (MQ=255) cgcATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTaaa > 1:316209/1‑240 (MQ=255) cgcATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTaaa > 2:109120/1‑240 (MQ=255) cgcATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTaaa > 1:146780/1‑240 (MQ=255) ttACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATa < 1:55629/239‑1 (MQ=255) aCCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCg > 2:902745/1‑240 (MQ=255) tCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAt > 1:678904/1‑72 (MQ=255) tCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAt < 2:678902/72‑1 (MQ=255) tCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTccc > 1:1027361/1‑240 (MQ=255) tCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCAACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTccc > 1:1091123/1‑240 (MQ=255) cGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGcc < 2:997176/172‑1 (MQ=255) tCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGccgccg > 2:329622/1‑121 (MQ=255) tCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGccgccg < 1:329622/121‑1 (MQ=255) tCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGa > 2:87121/1‑205 (MQ=255) tCATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGa < 1:87121/205‑1 (MQ=255) cATTTCGGTATGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCt < 2:160273/240‑1 (MQ=255) cacaTGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCg < 2:465393/237‑1 (MQ=255) tGGTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGgag > 1:1050611/1‑239 (MQ=255) ggTAGCGAATCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGgaga < 2:316209/239‑1 (MQ=255) gcaTCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAgcgc < 2:875203/150‑1 (MQ=255) aaTCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAt > 1:984243/1‑45 (MQ=255) aaTCAAACATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGAt < 2:984241/45‑1 (MQ=255) aaCATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTcc > 2:347944/1‑239 (MQ=255) cATCCCCGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCgg < 2:785592/239‑1 (MQ=255) ccccGCTGTACCCTGAGTACGCCCGTCACAAGGTTCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAAc < 1:101222/227‑1 (MQ=255) ccccGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCAtt < 2:828884/240‑1 (MQ=255) ccccGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCAtt < 1:716763/240‑1 (MQ=255) ccccGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCAtt < 1:109120/240‑1 (MQ=255) ccGCTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCATTCa < 1:335743/240‑1 (MQ=255) | GCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATCGCAACTCGCCACACCAATAACTGCTTTCGCGTCGGGCAGAGAGCGAATAAGGCGGCGCATTACCATCGATGCGTCATTTCGGTATGGTAGCGAATCAAACATCCCCGTTGTACCCTGAGTACGCCCGTCACAAGGATCGGAGACGTACACGGCATAGGGCAGGGCATGGTTGGCTTTAATAACCTCGGCCGCCGCTTTCATCTGGATGTCCAGTTCGTAATGCCCCTGGTGCAACGCCAGCGCCACGGGTTTACCGTCTGCGCCGCGTAAGCCACCGAGTGTACTGAGCAGTAAAATACCGTCCCGATCCAGCTCGTCCGGAGACCAACCCATTCCGGCATTCA > NC_000913/4523498‑4523952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |