Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,453,738 T→A intergenic (‑96/‑189) paaZ ← / → paaA oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase/phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,453,7380TA100.0% 319.7 / NA 79intergenic (‑96/‑189)paaZ/paaAoxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase/phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (49/30);  total (49/30)

CTGGCGGGCAGCCGCCATATCAAGACCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGG  >  NC_000913/1453505‑1453972
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          
cTGGCGGGCAGCCGCCATATCAAGACCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGtat                                                                                                                                                                                                                                      <  1:175887/240‑1 (MQ=255)
             gccATATCAAGACCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGaa                                                                                                                                                                                                                         <  1:826303/240‑1 (MQ=255)
                atatCAAGACCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGaaaa                                                                                                                                                                                                                       <  1:80104/239‑1 (MQ=255)
                        aCCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAAt                                                                                                                                                                                                                >  1:292657/1‑238 (MQ=255)
                         ccTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCa                                                                                                                                                                                                             <  2:1078262/240‑1 (MQ=255)
                             cACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTg                                                                                                                                                                                                          >  1:111118/1‑239 (MQ=255)
                                  gTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGGACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACa                                                                                                                                                                                                                     >  1:806082/1‑223 (MQ=255)
                                       ttCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATg                                                                                                                                                                                                >  2:705454/1‑239 (MQ=255)
                                          ccATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGAttt                                                                                                                                                                                            >  1:760102/1‑240 (MQ=255)
                                            aTAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCa                                                                                                                                                                                                             >  2:355731/1‑221 (MQ=255)
                                            aTAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTta                                                                                                                                                                                           >  2:313841/1‑239 (MQ=255)
                                                 gCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCa                                                                                                                                                                                                             >  1:26179/1‑216 (MQ=255)
                                                   cTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATa                                                                                                                                                                                   >  2:598778/1‑240 (MQ=255)
                                                    tCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATa                                                                                                                                                                                   >  1:34116/1‑239 (MQ=255)
                                                     cgccgcTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACa                                                                                                                                                                                                                     >  2:207771/1‑204 (MQ=255)
                                                     cgccgcTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAgg                                                                                                                                                                                 >  1:1056323/1‑240 (MQ=255)
                                                     cgccgcTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAgg                                                                                                                                                                                 >  1:119131/1‑240 (MQ=255)
                                                     cgccgcTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAgg                                                                                                                                                                                 >  1:947032/1‑240 (MQ=255)
                                                      gccgcTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTGAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTta                                                                                                                                                                                           <  2:59702/229‑1 (MQ=255)
                                                            aaTAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGaa                                                                                                                                                                          <  1:620840/240‑1 (MQ=255)
                                                                 cGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCg                                                                                                                                                                     >  1:1000413/1‑240 (MQ=255)
                                                                  gtggtgAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGt                                                                                                                                                                    <  1:1111687/240‑1 (MQ=255)
                                                                    ggtgAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTca                                                                                                                                                                  <  1:115705/240‑1 (MQ=255)
                                                                        aaTCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGt                                                                                                                                                              >  1:512116/1‑240 (MQ=255)
                                                                          tCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGtt                                                                                                                                                             <  2:3978/239‑1 (MQ=255)
                                                                                 gCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATa                                                                                                                                                     <  1:247659/240‑1 (MQ=255)
                                                                                          ccGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCaa                                                                                                                                                                                                                                 >  1:679378/1‑155 (MQ=255)
                                                                                           cGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTtg                                                                                                                                            >  1:1077245/1‑239 (MQ=255)
                                                                                            ggCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTtgt                                                                                                                                           >  1:937382/1‑239 (MQ=255)
                                                                                                  aCTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGAtttt                                                                                                                                     >  1:193490/1‑239 (MQ=255)
                                                                                                     gCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACtt                                                                                                                                 <  1:261629/240‑1 (MQ=255)
                                                                                                      ccAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACtt                                                                                                                                 >  2:282215/1‑239 (MQ=255)
                                                                                                              cGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATtgt                                                                                                                        >  1:972871/1‑240 (MQ=255)
                                                                                                              cGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATtgt                                                                                                                        >  1:470169/1‑240 (MQ=255)
                                                                                                                gATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCg                                                                                                                                                                            <  2:1050754/186‑1 (MQ=255)
                                                                                                                gATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCg                                                                                                                                                                            >  1:1050757/1‑186 (MQ=255)
                                                                                                                gATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATtgtg                                                                                                                       >  2:127763/1‑239 (MQ=255)
                                                                                                                 aTAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACNGataaata                                                                                                                                                                                                   >  2:386919/1‑162 (MQ=255)
                                                                                                                     gAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACtt                                                                                                                 >  1:293758/1‑240 (MQ=255)
                                                                                                                        aCTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCa                                                                                                              <  1:931939/240‑1 (MQ=255)
                                                                                                                          tGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGaaa                                                                                                                                                                         >  1:149496/1‑179 (MQ=255)
                                                                                                                           ggCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGAtt                                                                                                                                                                                             >  2:17111/1‑158 (MQ=255)
                                                                                                                           ggCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGAtt                                                                                                                                                                                             <  1:17111/158‑1 (MQ=255)
                                                                                                                           ggCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATaa                                                                                                           >  1:302393/1‑240 (MQ=255)
                                                                                                                                     tgcATCGCTACTCTCCAGATGTTTCACATTGCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAAc                                                                                                                   <  2:732708/222‑1 (MQ=255)
                                                                                                                                            cTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCgtgt                                                                                          >  2:749372/1‑240 (MQ=255)
                                                                                                                                            cTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCgtgt                                                                                          >  1:1055391/1‑240 (MQ=255)
                                                                                                                                                 ctcCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTtta                                                                                     >  2:190660/1‑240 (MQ=255)
                                                                                                                                                    cAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTttaatt                                                                                  >  1:66465/1‑240 (MQ=255)
                                                                                                                                                       aTGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTttaattaa                                                                                >  2:400512/1‑239 (MQ=255)
                                                                                                                                                       aTGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTtaattaat                                                                               >  1:1057390/1‑240 (MQ=255)
                                                                                                                                                           ttCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTGTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAACTCCGTCACAGTTCAAACATACACAATTTGTGATTTTACTTAACTATTGTGTAAc                                                                                                                   <  2:892374/200‑1 (MQ=255)
                                                                                                                                                            tCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTtgt                                                                                                                                           >  1:839256/1‑175 (MQ=255)
                                                                                                                                                            tCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTttaat                                                                                   >  2:671302/1‑231 (MQ=255)
                                                                                                                                                            tCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACg                                                                          >  1:772997/1‑240 (MQ=255)
                                                                                                                                                            tCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACg                                                                          >  2:764726/1‑240 (MQ=255)
                                                                                                                                                                    cTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTgg                                                                  <  1:78485/240‑1 (MQ=255)
                                                                                                                                                                     tGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTgg                                                                  <  1:508174/239‑1 (MQ=255)
                                                                                                                                                                        tGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAAt                                                               >  1:683961/1‑239 (MQ=255)
                                                                                                                                                                         gCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGACTTATAAAAATAGGGTGCGa                                                                                                                                                                           >  2:110262/1‑130 (MQ=255)
                                                                                                                                                                          cTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCg                                                             >  1:84401/1‑239 (MQ=255)
                                                                                                                                                                            aaTAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTaa                                                          <  2:806080/240‑1 (MQ=255)
                                                                                                                                                                               aGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAgg                                                       >  1:668057/1‑240 (MQ=255)
                                                                                                                                                                                 ttAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGt                                                      <  2:34116/239‑1 (MQ=255)
                                                                                                                                                                                  tAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATa                                                                                                            <  2:1076892/184‑1 (MQ=255)
                                                                                                                                                                                       cgcgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACg                                               <  2:1001909/240‑1 (MQ=255)
                                                                                                                                                                                         cgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGt                                              >  2:52089/1‑239 (MQ=255)
                                                                                                                                                                                         cgAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTCAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGt                                              <  1:313841/239‑1 (MQ=255)
                                                                                                                                                                                          gAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTa                                                           <  2:713125/225‑1 (MQ=255)
                                                                                                                                                                                                    aaGCAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAagaaga                                  <  2:61780/240‑1 (MQ=255)
                                                                                                                                                                                                       cAAAGGATCTTTTAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAAc                                >  1:589326/1‑239 (MQ=255)
                                                                                                                                                                                                                 tttAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGc                       <  2:119131/238‑1 (MQ=255)
                                                                                                                                                                                                                 tttAACGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCaa                     >  1:216522/1‑240 (MQ=255)
                                                                                                                                                                                                                     aCGAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGa                 <  2:512115/240‑1 (MQ=255)
                                                                                                                                                                                                                       gAAATGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGAt                <  1:598779/239‑1 (MQ=255)
                                                                                                                                                                                                                          aTGTTAACTATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGcc            <  1:423106/240‑1 (MQ=255)
                                                                                                                                                                                                                                  tATGCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGaaa     <  2:937380/239‑1 (MQ=255)
                                                                                                                                                                                                                                     gCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACgg  >  2:1036981/1‑239 (MQ=255)
                                                                                                                                                                                                                                     gCGAACTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACg   >  2:948179/1‑238 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          
CTGGCGGGCAGCCGCCATATCAAGACCTTCACTGGTCACTTCCCATAACGCCTCGCCGCTAATAGCGTGGTGAATCAAACGGCTACGGCCCCGGCCAGACTGCCAGGTACCGGATAAGAAACTGGCTAACTGCTGCATCGCTACTCTCCAGATGTTTCACATTTCTGTTGCTAATAGTTAAATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTAATGCACTGATAAATAATGATTTATAAAAATAGGGTGCGAAATCCGTCACAGTTCAAACATACAAAATTTGTGATTTTACTTAACTATTGTGTAACTTTCATAAAACAATGTGATTCGTGTTTTTAATTAATTCACGAAAACTGGAATCGTAAAGGTGATGACGTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGG  >  NC_000913/1453505‑1453972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: