| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,398,001 | Δ29,480 bp | [uspE]–[lomR] | 41 genes [uspE], fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzpR, rzoR, trkG, ynaK, ydaY, [ynaA], [lomR] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1398001 | 1427480 | 29480 | 26 [0] | [0] 26 | [uspE]–[lomR] | [uspE],fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,[ynaA],[lomR] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1398000 | 0 (0.000) | 26 (0.870) | 22/418 | 0.4 | 100% | coding (623/951 nt) | uspE | universal stress protein with a role cellular motility |
| ? | NC_000913 | 1427481 = | 0 (0.000) | coding (1028/1029 nt) pseudogene (93/210 nt) |
ynaA lomR |
Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA Rac prophage; protein LomR_1 |
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