Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,258,932	IS5 (+) +4 bp	coding (142‑145/279 nt)	ychH →	stress‑induced protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275149	NA (NA)	48 (0.990)	37/424	0.3	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	= 1258935	0 (0.000)					coding (145/279 nt)	ychH	stress‑induced protein
*	?	NC_000913	1258932 =	0 (0.000)	40 (0.820)	29/426	0.6	100%	coding (142/279 nt)	ychH	stress‑induced protein
	?	NC_000913	2101749 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region

CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/274910‑275149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTAAAGTATAGACAACACCCAGTGGGTTATGTGCGGG  <  NC_000913/1258935‑1258699                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCGATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC                                                                                                                                                                                                                                               >  2:124880/1‑240   AGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                                                                                                                              <  2:478919/239‑1     CGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC                                                                                                                                                                                                                                               <  2:139678/236‑1       GATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCA                                                                                                                                                                                                                                         <  1:363675/240‑1            GGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCA                                                                                                                                                                                                                                    <  2:517007/240‑1                 CCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCAT                                                                                                                                                                                                                                <  2:186455/239‑1                                   GGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCA                                                                                                                                                                                                              >  2:227399/1‑239                                         AAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAA                                                                                                                                                                                                       <  1:356642/240‑1                                               CTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCTCCATGTGCGAAATACTAGG                                                                                                                                                                                                                 >  2:87778/1‑224                                                   ATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAAC                                                                                                                                                                                             <  1:168302/240‑1                                                   ATGACTTCCACCATGTGTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAAC                                                                                                                                                                                             <  1:180696/240‑1                                                        TTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTT                                                                                                                                                                                        <  1:227401/240‑1                                                          CCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGA                                                                                                                                                                                      >  1:378804/1‑240                                                              CATGTGTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGG                                                                                                                                                                                                                 <  2:419399/209‑1                                                                        CATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGG                                                                                                                                                                                                                 <  2:423298/199‑1                                                                           GGCAGAATCTGCTACATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                                                                                                                              <  1:384526/167‑1                                                                                  TCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCA                                                                                                                                                              <  1:464018/240‑1                                                                                  TCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCA                                                                                                                                                              <  2:489465/240‑1                                                                                      CTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCAT                                                                                                                                                          >  1:363336/1‑240                                                                                      CTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGG                                                                                                                                                                                          >  2:333036/1‑208                                                                                        CCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTA                                                                                                                                                        <  1:53066/240‑1                                                                                        CCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATT                                                                                                                                                         <  2:307434/239‑1                                                                                        CCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACC                                                                                                                                                               <  2:193340/233‑1                                                                                           ttCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGC                                                                                                                                                                                                               <  2:200528/180‑1                                                                                           TGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACC                                                                                                                                                      >  1:550241/1‑239                                                                                           TGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACC                                                                                                                                                      >  1:195765/1‑239                                                                                                           CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCAT                                                                                                                                     <  1:340043/240‑1                                                                                                                                        TGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGA                                                                                                                                   <  1:516111/213‑1                                                                                                                                                                           ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGGTCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTC                                                                                    >  2:299624/1‑225                                                                                                                                                                                  ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTCTTCGCACCTTCCTTAGCACTGCACCAGCTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACTACCATTGCCACCAGACCCATCCCCATGAGCACGTTACC                                                                                                                         <  2:278638/181‑1                                                                                                                                                                                   CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACA                                                              <  2:285018/239‑1                                                                                                                                                                                   CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACA                                                              >  1:258204/1‑239                                                                                                                                                                                   CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCG                                                                                                                                                                                                                           >  2:92091/1‑82                                                                                                                                                                                   CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCG                                                                                                                                                                                                                           <  1:92092/82‑1                                                                                                                                                                                     CTGTTCTATGGCTCNAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGC                                                                                                     <  2:252931/198‑1                                                                                                                                                                                             TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCC                                                   >  2:323224/1‑240                                                                                                                                                                                             TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGC                                                                                                     >  2:162466/1‑190                                                                                                                                                                                              GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCT                                                  <  1:398347/240‑1                                                                                                                                                                                              GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATA                                                       <  1:404134/235‑1                                                                                                                                                                                                CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCT                                                >  1:359653/1‑240                                                                                                                                                                                                  CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGAACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTC                                              >  1:162600/1‑240                                                                                                                                                                                                           AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGT                                     <  1:141164/240‑1                                                                                                                                                                                                           AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGT                                     >  1:257051/1‑240                                                                                                                                                                                                            AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTA                                    <  1:538901/240‑1                                                                                                                                                                                                            AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTA                                    <  1:199246/240‑1                                                                                                                                                                                                                   TCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGCTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGG                                                                       >  2:225996/1‑198                                                                                                                                                                                                                       ATATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTAAAGTATAGACA                         >  1:338966/1‑240                                                                                                                                                                                                                        TATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTCACGAAGCGTTTTTGCGTTTCATATGTCACCTCCG                                                                                  >  2:18820/1‑182                                                                                                                                                                                                                        TATCAGGGACTTGTTCGCACCTTCCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTAAAGTATAGACAA                        <  1:474989/240‑1                                                                                                                                                                                                                                               CCTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTAAAGTATAGACAACACCCAGTGGGTTATGTGCGGG  >  1:452337/1‑239                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/274910‑275149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAGCACTGCACCATGTGCGAAATACTGGGGCATATTAAACTGTGGTAACTGGTTGAGGATTGAATACCCCACGCCGACCACCATTACCACCAGACCCAACCCCATGAGCACGTTACCGAGTAACGAAGCGTTTTTGCGTTTCATATGTCACCTCCGGAACTTTCTGGGTTGTAACAGGGAATACCCCTCTTCCTTATGTGTAAAGTATAGACAACACCCAGTGGGTTATGTGCGGG  <  NC_000913/1258935‑1258699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.