| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3339621 | 157 (1.840) | 3 (0.040) | 3/416 | 8.2 | 2.0% | coding (445/810 nt) | mlaF | intermembrane phospholipid transport system, ATP binding subunit MlaF |
| ? | NC_000913 | = 3339707 | 137 (1.670) | coding (359/810 nt) | mlaF | intermembrane phospholipid transport system, ATP binding subunit MlaF | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCCGCGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3339375‑3339621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccatTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGCGTGAC < NC_000913/3339707‑3339476 CCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCC > 2:451046/1‑240CCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGC < 1:399656/239‑1 ACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCCGCGCCA < 2:810434/239‑1 GGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCCGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGA < 2:908825/232‑1 CGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCCGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCG < 1:396505/239‑1 ACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCC > 2:857776/1‑67 CGCGCCAGCGCTGCACGCCGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCC > 2:185509/1‑61 CGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGCGTGAC > 2:742536/1‑240 CGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGC > 2:654916/1‑235 GCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCG < 2:620909/226‑1 CCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGCGCTGCACGCCGCGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3339375‑3339621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccatTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGCGTGAC < NC_000913/3339707‑3339476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |