Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,366,751	Δ295 bp	IS5‑mediated	yhcE–[yhcF]	yhcE, [yhcF]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3365702–3366753	3367045	293–1344	8 [7]	[0] 64	[insH‑10]–[yhcF]	[insH‑10],yhcE,[yhcF]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3366750	NA (NA)	64 (1.780)	44/424	0.0	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	3367046 =	0 (0.000)					coding (121/717 nt)	yhcF	DUF1120 domain‑containing protein YhcF

AAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACAA  >  NC_000913/3366820‑3367283                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                              cgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAAcggcg                                                                                                                                                                                                                                   <  1:91560‑M2/13‑1 (MQ=255)   ccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGa                                                                                                                                                                                                                                 <  2:141360‑M2/15‑1 (MQ=255)   ccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAg                                                                                                                                                                                                                                >  1:423197‑M2/225‑240 (MQ=255)    cggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAgt                                                                                                                                                                                                                               >  1:367990‑M2/224‑240 (MQ=255)              cagccttggggtaaaacggctcgatgccttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTc                                                                                                                                                                                                                     <  2:25188‑M2/27‑1 (MQ=255)                     ggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAgttgtt                                                                                                                                                                                                                           >  1:322491‑M2/207‑227 (MQ=255)                          aaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTc                                                                                                                                                                                                          <  2:207504‑M2/38‑1 (MQ=255)                                 ctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATa                                                                                                                                                                                                  >  2:364890‑M2/195‑240 (MQ=255)                                 ctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATa                                                                                                                                                                                                  <  1:289834‑M2/46‑1 (MQ=255)                                 ctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATa                                                                                                                                                                                                  >  1:368503‑M2/195‑240 (MQ=255)                                  tcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAg                                                                                                                                                                                                 <  1:301567‑M2/47‑1 (MQ=255)                                              accatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTa                                                                                                                                                                                                                 <  2:351175‑M2/31‑1 (MQ=255)                                              accatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgca                                                                                                                                                                                     <  1:325576‑M2/59‑1 (MQ=255)                                               ccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgca                                                                                                                                                                                     <  1:158324‑M2/59‑1 (MQ=255)                                               ccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgca                                                                                                                                                                                     <  1:349757‑M2/59‑1 (MQ=255)                                               ccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatcatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgca                                                                                                                                                                                     <  2:185299‑M2/59‑1 (MQ=255)                                                 atgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgacccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACttt                                                                                                                                                                                            <  2:405830‑M2/52‑1 (MQ=255)                                                                  aatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGa                                                                                                                                                                  <  2:423188‑M2/78‑1 (MQ=255)                                                                        ctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcttgatgaaccctgttctatggctacagctgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCaa                                                                                                                                                                                                                                        >  2:189439‑M2/156‑163 (MQ=255)                                                                        ctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGta                                                                                                                                                           >  1:274310‑M2/156‑240 (MQ=255)                                                                        ctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGta                                                                                                                                                           >  1:76870‑M2/156‑240 (MQ=255)                                                                          ccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGtaat                                                                                                                                                         <  2:252149‑M2/87‑1 (MQ=255)                                                                             tgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGtaatatt                                                                                                                                                      >  1:26878‑M2/151‑240 (MQ=255)                                                                                  gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGtaatattaata                                                                                                                                                  >  1:273820‑M2/146‑239 (MQ=255)                                                                                           atctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACg                                                                                                                                                                                       <  2:103449‑M2/57‑1 (MQ=255)                                                                                           atctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACg                                                                                                                                                             <  2:55720‑M2/83‑1 (MQ=255)                                                                                            tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCaa                                                                                                                                                                                                    >  2:160431‑M2/136‑179 (MQ=255)                                                                                                            acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCg                                                                                                                       >  1:141500‑M2/120‑240 (MQ=255)                                                                                                                 gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTAc                                                                                                                         <  1:156869‑M2/119‑1 (MQ=255)                                                                                                                                        gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCAt                                                                                                                   >  2:326153‑M2/92‑216 (MQ=255)                                                                                                                                              gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGa                                                                                     <  1:45887‑M2/155‑1 (MQ=255)                                                                                                                                               taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTg                                                                                                                 >  1:261942‑M2/85‑211 (MQ=255)                                                                                                                                               taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGa                                                                                     <  1:265650‑M2/155‑1 (MQ=255)                                                                                                                                                        gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGacc                                                                           >  1:58290‑M2/76‑240 (MQ=255)                                                                                                                                                         actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGacc                                                                           >  2:334203‑M2/75‑239 (MQ=255)                                                                                                                                                                     ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGa                                                                >  2:226437‑M2/63‑238 (MQ=255)                                                                                                                                                                     ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATa                                                              >  2:337213‑M2/63‑240 (MQ=255)                                                                                                                                                                       ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGt                                                            <  1:11762‑M2/180‑1 (MQ=255)                                                                                                                                                                       ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGt                                                            >  2:216260‑M2/61‑240 (MQ=255)                                                                                                                                                                       ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGt                                                            <  1:365073‑M2/180‑1 (MQ=255)                                                                                                                                                                        tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTg                                                           <  1:106005‑M2/181‑1 (MQ=255)                                                                                                                                                                        tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTg                                                           <  2:127229‑M2/181‑1 (MQ=255)                                                                                                                                                                        tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTg                                                           <  1:260006‑M2/181‑1 (MQ=255)                                                                                                                                                                              atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGt                                                      <  1:334208‑M2/186‑1 (MQ=255)                                                                                                                                                                               tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCa                                                    >  1:144467‑M2/53‑240 (MQ=255)                                                                                                                                                                               tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCa                                                    >  2:359969‑M2/53‑240 (MQ=255)                                                                                                                                                                               tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACACAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCa                                                    >  2:98550‑M2/53‑240 (MQ=255)                                                                                                                                                                                  ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCagag                                                 <  1:250604‑M2/191‑1 (MQ=255)                                                                                                                                                                                    ccagatgacaaacatgatctcatatcagggacttgtttgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAgtg                                               <  1:345554‑M2/193‑1 (MQ=255)                                                                                                                                                                                    ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTgg                                                          >  1:307392‑M2/48‑229 (MQ=255)                                                                                                                                                                                    ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAgtg                                               >  2:340587‑M2/48‑240 (MQ=255)                                                                                                                                                                                    ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAATATGACCACCGGAAAAGATAg                                                             >  2:236359‑M2/48‑226 (MQ=255)                                                                                                                                                                                       gatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAgtggtg                                            >  1:200960‑M2/45‑240 (MQ=255)                                                                                                                                                                                                  tgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACttt                                                                                                                                                                                            >  2:184644‑M2/34‑85 (MQ=255)                                                                                                                                                                                                  tgatctcatatcagggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACttt                                                                                                                                                                                            <  1:184644‑M2/52‑1 (MQ=255)                                                                                                                                                                                                       tcgtatcagggacttgttcgcaccttccCTAAGCAACGGGGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACAGAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGCTAGTGGGGGTCAGAgtg                                               <  2:179798‑M2/193‑1 (MQ=255)                                                                                                                                                                                                                ggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAgg                   <  1:253195‑M2/221‑1 (MQ=255)                                                                                                                                                                                                                ggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAgg                   >  2:28119‑M2/20‑240 (MQ=255)                                                                                                                                                                                                                ggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAgg                   >  2:16724‑M2/20‑240 (MQ=255)                                                                                                                                                                                                                ggacttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATAACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGaaaccc                                                                                            >  2:28905‑M2/20‑165 (MQ=255)                                                                                                                                                                                                                   cttgttcgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACATTAAATGGCGGa                     >  2:375211‑M2/17‑235 (MQ=255)                                                                                                                                                                                                                         cgcaccttccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCGTTCAGTCAATAGACTTTCAACGCAGCACTACACACGGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGa                                                                             >  2:121059‑M2/11‑173 (MQ=255)                                                                                                                                                                                                                                 ccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACaa  <  1:268353‑M2/238‑1 (MQ=255)                                                                                                                                                                                                                                 ccCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACaa  <  2:38042‑M2/238‑1 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                              AAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACAA  >  NC_000913/3366820‑3367283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑