Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,738,922	T→C	T293A (ACG→GCG)	ydhB ←	putative LysR family DNA‑binding transcriptional regulator YdhB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,738,922	0	T	C	100.0%	218.3 / NA	60	T293A (ACG→GCG)	ydhB	putative LysR family DNA‑binding transcriptional regulator YdhB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/31);  total (29/31)

CCGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATACAGGTTGCCGATGATTCCCAGTCAGGCACGA  >  NC_000913/1738696‑1739140                                                                                                                                                                                                                                   |                                                                                                                                                                                                                           ccGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCg                                                                                                                                                                                                               <  1:562029/240‑1 (MQ=255)  cGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCg                                                                                                                                                                                                               >  1:50022/1‑239 (MQ=255)    gcgcTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCgaga                                                                                                                                                                                                            >  1:522326/1‑240 (MQ=255)                    aTCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAgg                                                                                                                                                                                            >  2:279784/1‑240 (MQ=255)                     tCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGt                                                                                                                                                                                           <  1:99299/240‑1 (MQ=255)                         ccAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAgg                                                                                                                                                                                            >  1:10127/1‑235 (MQ=255)                            aaaGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCa                                                                                                                                                                                                                        <  2:171614/204‑1 (MQ=255)                                 ttCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCg                                                                                                                                                                                <  1:490742/239‑1 (MQ=255)                                                  cGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGcc                                                                                                                                                              <  1:197504/240‑1 (MQ=255)                                                  cGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGcc                                                                                                                                                              >  1:576499/1‑240 (MQ=255)                                                                   gATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCg                                                                                                                                                                                                               <  2:216354/174‑1 (MQ=255)                                                                        tatcgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGcc                                                                                                                                                                                                                >  2:68277/1‑168 (MQ=255)                                                                        tatcgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGcc                                                                                                                                                              >  2:266394/1‑218 (MQ=255)                                                                        tatcgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAAt                                                                                                                                         >  2:390983/1‑239 (MQ=255)                                                                        tatcgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATc                                                                                                                                        >  1:109443/1‑240 (MQ=255)                                                                        tatcgtCAACAAACGT‑‑‑GAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCgg                                                                                                                                     >  1:719805/1‑240 (MQ=255)                                                                          tcgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGaa                                                                                                                                          >  2:725931/1‑236 (MQ=255)                                                                               aacaaACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGCCATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGa                                                                                                                                    >  2:585309/1‑237 (MQ=255)                                                                                              ccGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTc                                                                                                                   <  2:200992/239‑1 (MQ=255)                                                                                                   gTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTc                                                                                                                         <  2:269219/228‑1 (MQ=255)                                                                                                      tATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTa                                                                                                           <  1:132118/239‑1 (MQ=255)                                                                                                              tGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGacaaca                                                                                                                                                 >  1:114749/1‑193 (MQ=255)                                                                                                              tGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGaa                                                                                                                                   >  2:49613/1‑207 (MQ=255)                                                                                                               gCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCTAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTCTCCAGTTCTAATGCTACCCACTTccc                                                                                                 <  1:235321/240‑1 (MQ=255)                                                                                                                cATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGt                                                                                                                                                                                           >  2:442446/1‑149 (MQ=255)                                                                                                                cATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTcc                                                                                                                        >  2:547514/1‑216 (MQ=255)                                                                                                                cATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTcccc                                                                                                >  2:320790/1‑240 (MQ=255)                                                                                                                  tCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTc                                                                                              >  1:600696/1‑240 (MQ=255)                                                                                                                      cgcTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCAtt                                                                                           >  1:84576/1‑239 (MQ=255)                                                                                                                                aaCGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGtt                                                                                >  1:40627/1‑240 (MQ=255)                                                                                                                                       cTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGaa                                                                         >  2:271602/1‑240 (MQ=255)                                                                                                                                        tCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGaaa                                                                        >  1:624649/1‑240 (MQ=255)                                                                                                                                         ccGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGATAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGaaa                                                                        <  2:229991/239‑1 (MQ=255)                                                                                                                                             ggCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAAtg                                                                      <  2:568836/237‑1 (MQ=255)                                                                                                                                                   cGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGtt                                                                  <  2:576489/235‑1 (MQ=255)                                                                                                                                                    ggCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCAcc                                                            <  2:95255/240‑1 (MQ=255)                                                                                                                                                     gCCCGTCCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCAcc                                                            <  2:210216/239‑1 (MQ=255)                                                                                                                                                        cGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATcc                                                        <  1:610294/240‑1 (MQ=255)                                                                                                                                                        cGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATcc                                                        <  1:279787/240‑1 (MQ=255)                                                                                                                                                        cGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATcc                                                        <  1:32576/240‑1 (MQ=255)                                                                                                                                                        cGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATcc                                                        <  2:522317/240‑1 (MQ=255)                                                                                                                                                            ccGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCt                                                      <  2:684433/238‑1 (MQ=255)                                                                                                                                                            ccGCGACTAGCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCt                                                      <  2:495595/238‑1 (MQ=255)                                                                                                                                                                     tcgtcgTTAATAACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAAtgtg                                                                    <  1:89763/215‑1 (MQ=255)                                                                                                                                                                        tcgtTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGc                                        >  1:524040/1‑240 (MQ=255)                                                                                                                                                                         cgtTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGc                                        <  2:158153/239‑1 (MQ=255)                                                                                                                                                                           ttAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGtt                                                                  <  2:299210/211‑1 (MQ=255)                                                                                                                                                                               tCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGAt                                  >  1:283116/1‑239 (MQ=255)                                                                                                                                                                                cACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATa                                 <  1:271605/239‑1 (MQ=255)                                                                                                                                                                                  cccGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTg                                         <  1:323697/229‑1 (MQ=255)                                                                                                                                                                                     gTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATACAGGtt                           >  2:227324/1‑240 (MQ=255)                                                                                                                                                                                      ttGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCTTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCa                                                                                                                                                                                    >  2:54556/1‑86 (MQ=255)                                                                                                                                                                                                 tctTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGc                                                                            >  2:227281/1‑179 (MQ=255)                                                                                                                                                                                                  ctTCCGGCTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATcc                                                        <  1:189740/198‑1 (MQ=255)                                                                                                                                                                                                         cTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTcc                                                                                                                        >  2:27947/1‑127 (MQ=255)                                                                                                                                                                                                         cTCCCGCAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTcc                                                                                                                        <  1:27947/127‑1 (MQ=255)                                                                                                                                                                                                              gCAGCCACTCCTTATTCAGCGCCTCACTATCACCGAGATACTCAAGCAACCAGGTTAACGCAgg                                                                                                                                                                                  <  2:46219/64‑1 (MQ=255)                                                                                                                                                                                                               cAGCCACTCCTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATACAGGTTGCCGATGATTCCCAGTCAGGCACGa  <  2:283113/239‑1 (MQ=255)                                                                                                                                                                                                                        cTTATTCAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCa                                                           <  2:255090/173‑1 (MQ=255)                                                                                                                                                                                                                              cAGCGCCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATACAGGTTGCCGATGATTCCCAGTc          >  1:238220/1‑216 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                           CCGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTTTCCAGTTCTAATGCTACCCACTTCCCCTCATTAAGCCACGGTTTGGCGAAATGTGTTGGCACCATCCCTATGCATAATCCTGCCGAGATACAGGTTGCCGATGATTCCCAGTCAGGCACGA  >  NC_000913/1738696‑1739140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑