Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,125,778	IS1 (–) +9 bp	coding (217‑225/585 nt)	rimJ →	ribosomal‑protein‑S5‑alanine N‑acetyltransferase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1125778 =	0 (0.000)	61 (0.930)	42/426	0.5	100%	coding (217/585 nt)	rimJ	ribosomal‑protein‑S5‑alanine N‑acetyltransferase
	?	NC_000913	= 1979270	NA (NA)					noncoding (1/768 nt)	IS1	repeat region
*	?	NC_000913	= 1125786	0 (0.000)	74 (1.120)	47/426	0.3	100%	coding (225/585 nt)	rimJ	ribosomal‑protein‑S5‑alanine N‑acetyltransferase
	?	NC_000913	1978503 =	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

TTTATTGTGCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1126011‑1125778 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGC  <  NC_000913/1979270‑1979037                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTATTGTGCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGAT                                                                                                                                                                                                                                      <  2:80312/240‑1    ATTGTGCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCT                                                                                                                                                                                                                                   >  1:310559/1‑240         GCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAA                                                                                                                                                                                                                              <  1:39611/240‑1         GCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGAT                                                                                                                                                                                                                                      >  2:93515/1‑232              ATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTAC                                                                                                                                                                                                                         <  1:201194/240‑1              ATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTA                                                                                                                                                                                                                          <  2:473846/239‑1                       GCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAG                                                                                                                                                                                                                 >  1:662572/1‑239                       GCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAG                                                                                                                                                                                                                 >  2:658450/1‑239                            AATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATCAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTAC                                                                                                                                                                                                                         >  2:279991/1‑226                            AATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                                                                                                                                                           >  1:677875/1‑240                            AATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAAC                                                                                                                                                                                                                             >  1:645738/1‑222                                  ATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTT                                                                                                                                                                                                                   >  1:286927/1‑226                                    GAATATGTTGGGCGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTA                                                                                                                                                                                                                          <  1:518286/217‑1                                          ggTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG                                                                                                                                                                                               <  2:39195/236‑1                                                  CGCTGCATATAACGAATGGCTGCGGTCAGAGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCC                                                                                                                                                                                                                                <  1:12575/197‑1                                                         TATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGCGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                                                                                                                                                              <  2:222172/240‑1                                                            AACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                                                                                                                                                                           <  1:220193/240‑1                                                             ACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT                                                                                                                                                                                        >  1:296094/1‑226                                                                 ATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                      >  1:34366/1‑240                                                                 ATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                      >  2:686026/1‑240                                                                 ATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                      >  1:320844/1‑240                                                                 ATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                      >  1:171158/1‑240                                                                 ATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                                                                                                                                                           >  2:9598/1‑203                                                                  TGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                      >  1:707066/1‑239                                                                             AGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                                                                                                                                                          <  2:699366/240‑1                                                                               GGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                                                                                                                                                        >  1:487660/1‑240                                                                               GGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                                                                                                                                                        >  1:520089/1‑240                                                                                    CAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT                                                                                                                                                   >  1:246647/1‑240                                                                                    CAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT                                                                                                                                                             >  1:769673/1‑230                                                                                     AAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT                                                                                                                                                   <  1:132484/239‑1                                                                                                          CCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGC                                                                                                                              >  1:703227/1‑239                                                                                                               TTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG                                                                                                                        >  1:693010/1‑240                                                                                                                                  GAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGACGAAGTGGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGAGTAACGGCAAAAGCACCGCCGGAC                                                                                                      >  1:315603/1‑239                                                                                                                                    GATAGCAGGCATGAAAAGAGCCACGAACAACAATGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATC                                                                                                   <  1:479770/240‑1                                                                                                                                     ATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATC                                                                                                   <  2:379584/239‑1                                                                                                                                          AGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGC                                                                                              <  1:724732/239‑1                                                                                                                                                 AAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCT                                                                                       <  1:680800/239‑1                                                                                                                                                      AGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTC                                                                                 >  1:662347/1‑240                                                                                                                                                      AGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTC                                                                                 >  1:592947/1‑240                                                                                                                                                        CCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCAC                                                                               <  2:320839/240‑1                                                                                                                                                          ACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG                                                                                                                                       <  2:47276/182‑1                                                                                                                                                                      GGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                                                                 >  1:221745/1‑240                                                                                                                                                                          AAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC                                                                                                                                            <  1:171944/161‑1                                                                                                                                                                            ATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAAC                                                            >  2:388722/1‑239                                                                                                                                                                             TTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACT                                                           >  2:467412/1‑239                                                                                                                                                                                GCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  1:698986/240‑1                                                                                                                                                                                GCAACGCCAATAATCTCTTTTGCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC                                                                                                                                            <  2:483815/155‑1                                                                                                                                                                                 CAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  2:636381/239‑1                                                                                                                                                                                 CAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAACTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  1:304098/239‑1                                                                                                                                                                                      CCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  2:186945/234‑1                                                                                                                                                                                               TCTTTTACGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACAC                                            <  1:478952/236‑1                                                                                                                                                                                                      CGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAAC                                 <  2:310554/240‑1                                                                                                                                                                                                             GTCGAATAAGCCAAAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTAC                          <  2:78667/240‑1                                                                                                                                                                                                                 AATAACCC‑AAGTAGAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  1:464421/206‑1                                                                                                                                                                                                                               GAAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGA                  <  2:286923/230‑1                                                                                                                                                                                                                                AAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  1:633773/192‑1                                                                                                                                                                                                                                AAAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       >  2:633764/1‑192                                                                                                                                                                                                                                 AAGCTGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATA      <  1:658459/240‑1                                                                                                                                                                                                                                     TGAACCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGC  >  2:725215/1‑240                                                                                                                                                                                                                                      GAACCGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGC  <  2:355284/239‑1                                                                                                                                                                                                                                          CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                                       <  2:765856/182‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTATTGTGCGGCATATAATTAGCCATAATGCGATGAATATGTTGGGTGCGCTGCATATAACGAATGGCTGCGGTCAGGGCTTCAAACATGAGTCCTTTGCCCTGCCATTTTTGCCCAATCGAATAACCGAGATAGCAGGCATGAAAAGAGCCACGAACAACATTGGAAAAATTGGCAACGCCAATAATCTCTTTTTCGTCCGGGTCGAATAAGCCAAAGTAGAAAGCTGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1126011‑1125778 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGC  <  NC_000913/1979270‑1979037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.