Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,068,671 | A→G | V390A (GTA→GCA) | rutG ← | pyrimidine:H(+) symporter |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,068,671 | 0 | A | G | 100.0% | 140.1 / NA | 39 | V390A (GTA→GCA) | rutG | pyrimidine:H(+) symporter |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (18/21); total (18/21) |
TTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGGCAGCAGCAACAAACACCAGCGTCGAGTAGACTTTGGTCACGGCC > NC_000913/1068435‑1068898 | tttACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTg < 1:473115/240‑1 (MQ=255) cgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCa > 1:190789/1‑239 (MQ=255) aaTGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACACCTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGtt < 2:386566/239‑1 (MQ=255) tGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCaa > 2:345488/1‑228 (MQ=255) gTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCg > 1:216372/1‑240 (MQ=255) tCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGtt > 1:309305/1‑240 (MQ=255) gCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGtttt < 1:155058/239‑1 (MQ=255) ccgGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCa > 2:441476/1‑240 (MQ=255) gTAATCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCatat > 1:190031/1‑240 (MQ=255) cggcggTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCACCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTgcg > 2:237988/1‑240 (MQ=255) ccTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGaca < 2:608419/194‑1 (MQ=255) cTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATcc > 1:52917/1‑212 (MQ=255) cTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGaa < 1:366722/240‑1 (MQ=255) cTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGCACACAACAAtt > 2:544736/1‑239 (MQ=255) cGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGcac < 2:582969/239‑1 (MQ=255) ggTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGcacc < 1:587370/239‑1 (MQ=255) aCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAAGCGaca < 1:521972/168‑1 (MQ=255) cTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCgg < 2:309298/240‑1 (MQ=255) ttCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGaa < 1:378349/240‑1 (MQ=255) ttCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGaa < 2:216368/240‑1 (MQ=255) ttCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGaa < 2:422170/240‑1 (MQ=255) acaacGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGaa > 1:4185/1‑240 (MQ=255) cATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAAc > 2:446487/1‑214 (MQ=255) cgcgCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAACCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCg < 1:462373/239‑1 (MQ=255) cgcCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGt > 1:336413/1‑134 (MQ=255) cgcCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGt < 2:336406/134‑1 (MQ=255) cgcCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTg > 1:393109/1‑240 (MQ=255) cgcCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTg > 2:250231/1‑240 (MQ=255) aaaGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGaaa < 2:27363/239‑1 (MQ=255) aGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGca < 2:80578/182‑1 (MQ=255) tGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGca < 2:114172/175‑1 (MQ=255) cAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGaa > 1:367305/1‑224 (MQ=255) ccctcccAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGAt < 1:381394/240‑1 (MQ=255) aaaCCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGgcagcagc > 2:121656/1‑239 (MQ=255) aaaCCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGgcagcagc > 1:410027/1‑239 (MQ=255) cAAAATCACCCGCGCCCAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGGCAGCAGCAACAAACACCAGCGTCGAg < 1:446/239‑1 (MQ=255) aaaTCACCCGCGCACAGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGgcagcag < 2:236089/217‑1 (MQ=255) aGCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGGCAGCAGCAACAAACACCAGCGTCGAGTAGACTTTGGTCACGGcc > 1:155456/1‑240 (MQ=255) gCACTAAGGTTGCTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGGCAGCAGCAACAAacac < 2:414068/211‑1 (MQ=255) | TTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTACCGTTCTGGCTTAAATCGACACGGTTTTGTACCCATATCCTTGCGCCTGCGACGGCAATCAGCCCGAACACAACAATTGATGCACCACCAATAACCGCGGCCGGAATGGTATGAATCAGCGCACCAAATTTCGGTGAAAAGCCCAACAGCATGGCGATGACGGCAGCAGCAACAAACACCAGCGTCGAGTAGACTTTGGTCACGGCC > NC_000913/1068435‑1068898 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |