| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,168,239 | C→G | C3S (TGT→TCT) | mqsA ← | antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,168,239 | 0 | C | G | 98.6% | 267.4 / NA | 70 | C3S (TGT→TCT) | mqsA | antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (30/39); total (30/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCTTTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTAACTCATCTGCATTTAACAGGGCACTAC > NC_000913/3168005‑3168468 | agCTTTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGAttt < 1:311694/239‑1 (MQ=255) tttCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATAGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATAtt > 2:440341/1‑239 (MQ=255) cGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACtt < 2:4035/240‑1 (MQ=255) ttCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCtt > 1:102257/1‑240 (MQ=255) ttCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCtt < 1:300573/240‑1 (MQ=255) tataAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACg < 1:344832/240‑1 (MQ=255) taAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACgag < 1:393500/240‑1 (MQ=255) taAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACga > 2:446062/1‑239 (MQ=255) tCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGAt < 2:63299/240‑1 (MQ=255) ggTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGGCGATCAg > 1:329205/1‑240 (MQ=255) ggTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCa > 2:364593/1‑239 (MQ=255) gCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTa < 1:511117/239‑1 (MQ=255) gCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTa < 2:107704/239‑1 (MQ=255) cACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGAc > 2:275544/1‑214 (MQ=255) aTGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAAcc < 2:29503/240‑1 (MQ=255) ccATGAATGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTaa < 2:125713/235‑1 (MQ=255) aTGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGcc < 2:504350/239‑1 (MQ=255) aaGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGt < 1:40545/240‑1 (MQ=255) aaGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGt < 2:248050/240‑1 (MQ=255) tCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGa < 1:124409/208‑1 (MQ=255) tCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTg < 2:508250/232‑1 (MQ=255) tCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTa > 2:315999/1‑240 (MQ=255) ctctTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTATCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACa < 1:215137/239‑1 (MQ=255) ttATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGt < 1:454959/223‑1 (MQ=255) atgatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAg > 2:189632/1‑239 (MQ=255) atgatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGt > 1:353262/1‑240 (MQ=255) gatgCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTa > 2:315164/1‑239 (MQ=255) tctctTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATc < 1:470810/239‑1 (MQ=255) tctctTCGCAATGGACAAAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGAt < 1:511395/238‑1 (MQ=255) aCCGTTCATACCTTTCACTTCTGTTTTTCTTCCAACGAAGGTGTATGGAATATCTTTAATGCCATAAATCATTTCTCCCTTGTTGTTAACCAGACATTTCATATCACTTCTCCTAACTCGCGACGATCAGTACGTCATGAATTACAGTAATTTTAATCTAAAc < 2:210113/163‑1 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATTGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCt > 2:155446/1‑167 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGAt < 1:341732/202‑1 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGAt > 2:341726/1‑202 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATaaaa > 2:443033/1‑238 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGt < 1:197043/240‑1 (MQ=255) gTGGATACCTTTCAATACTGTTTTTCATCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGt < 1:487047/205‑1 (MQ=255) ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCt > 2:144337/1‑227 (MQ=255) ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCg > 1:402651/1‑240 (MQ=255) ggATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATAAGAGTAGGTGGTCATGCTTTTATAAAAGTc > 1:385722/1‑239 (MQ=255) tttCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTg > 2:98150/1‑240 (MQ=255) ttCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGa < 1:364599/240‑1 (MQ=255) ttCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGa < 1:356470/240‑1 (MQ=255) tNCTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTaa < 2:109751/156‑1 (MQ=255) tttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAAt > 2:255311/1‑239 (MQ=255) ttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGa < 2:231052/240‑1 (MQ=255) ttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGa < 2:312910/240‑1 (MQ=255) ttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGa < 1:399557/240‑1 (MQ=255) ttttCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTACTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGa < 2:359574/240‑1 (MQ=255) tCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGaaac < 1:24605/240‑4 (MQ=255) cggccACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAAc < 1:54216/237‑1 (MQ=255) cGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAAc < 2:338470/240‑1 (MQ=255) gTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGa < 1:371430/129‑1 (MQ=255) tCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGct < 1:361461/217‑1 (MQ=255) cACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGct < 2:458923/215‑1 (MQ=255) tatCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATc > 1:275013/1‑239 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGctc < 1:457244/197‑1 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGctc > 2:457237/1‑197 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGctc > 1:250417/1‑197 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGctc < 2:250412/197‑1 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAAt > 1:106306/1‑237 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCa > 1:342573/1‑240 (MQ=255) atCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCa > 2:36472/1‑240 (MQ=255) cTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATACaaa > 1:61584/1‑240 (MQ=255) aTGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCGTGGTGCTGTAAACATTCTGCCAGATAGTATGATCAGAGTAGGTGATCATGCTTTTATAAAAGTCGCTCTCTGAt > 2:484450/1‑196 (MQ=255) aTGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTaa > 2:366927/1‑240 (MQ=255) aaaCCATTTCTCCCTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTaca > 2:392411/1‑209 (MQ=255) cccTGGTGGCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTAACTCATCTGCATTTAACa < 2:85185/239‑1 (MQ=255) gCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTAACTCATCTGCATTTAACAGGGCACTAc > 1:47237/1‑240 (MQ=255) gCAAACCGGAGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTAACTCATCTGCATTTAACAGGGCACTAc > 1:78080/1‑240 (MQ=255) gaaCCGGCGATTTCATATTACTTCTCCTTAAACGAGACGATCAGTa < 2:482827/45‑1 (MQ=255) | AGCTTTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCGCCATGAAAGCATCTGACTCTTCTTTATTCATGATGCTCTCTTCGCAATGGACACAATATAAACCGTGGATACCTTTCAATACTGTTTTTCGTCCACGGAAGGTGTATGGAATATCTTTAATGCCAGAAACCATTTCTCCCTGGTGGCAAACCGGACATTTCATATTACTTCTCCTTAAACGAGACGATCAGTACGTCATGAATTACCGTAATTTTAAGATAAACCTGGCCTGTAACAAGCCTGGGTCTGTAAACATCCTGCCAGATAGTATGATCAGAGTAGGTGGTCATGCTTTTATAAAAGTCGCTCTCTGATAATCCAATGATAACATTACACATACCATCAAAATCCAAACCTAACTCATCTGCATTTAACAGGGCACTAC > NC_000913/3168005‑3168468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |