| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4620345 = | 587 (1.110) | 4 (0.010) | 3/94 | NT | 1.0% | intergenic (‑6/‑205) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | 4620392 = | 291 (0.660) | intergenic (‑53/‑158) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 101 total aligned reads displayed.
GGCTGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4620420‑4620345‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgaagtGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > CP009273/4620392‑4620458 GGCTGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGA > 1:36696527/1‑68 GCTGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAG > 1:40061926/1‑68 TGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGC < 1:25667234/68‑1 TGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGC < 1:4656152/68‑1 TGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGG < 1:38647532/67‑1 TGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGG < 1:13110883/67‑1 TGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGG < 1:25305284/67‑1 GGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCG > 1:38681032/1‑68 GATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGA < 1:36689081/67‑1 ATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:1060515/1‑68 ATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAA < 1:75633/67‑1 ATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAA < 1:1986986/67‑1 ATTAGGCGGCGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTTTCACGATAAACATAGAGGCGAAG > 1:43656116/1‑68 ttcGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:34521225/65‑1 TTAGGCGTGGAAAAAGGCTACACTTCGCCTTTGAAAACTCCTTATCACGATACACATAGAGGCGAAGT < 1:26673344/68‑1 TTAGGCGTGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:85115/68‑1 TTAGGCGTGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:8827429/68‑1 TTAGGCGGGGAAATAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:39934665/68‑1 TTAGGCGGGGAAAAAGTCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:24182513/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:25970622/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:1066339/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:28589905/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:24620202/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:29767452/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:32646018/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:328526/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:33868024/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:34024952/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:36101114/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:36814124/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:37494927/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:39121566/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:39647400/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:42766596/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:8105659/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:8784606/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:14597830/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:21403792/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:16860309/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:11775701/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:18300995/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:12687741/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:22763987/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:16250792/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:21608021/68‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG < 1:20365840/67‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG < 1:37398296/67‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:34693798/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG < 1:35009830/67‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:5087816/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:5029095/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:18457687/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG < 1:18321154/67‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:166487/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:39644968/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:29965782/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:40529151/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:26442900/1‑67 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAG < 1:40637240/67‑1 TTAGGCGGGGAAAAAGGCTACACTTCGCCTTAGAAAACTCATTATCACGATAAACATAGAGGCGAAG > 1:18694792/1‑67 TTAGGCGGGGAAAAAGGCTACACATCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT < 1:15659750/68‑1 GGGGAAAAAGGCTGCACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTGTAGCC < 1:39116261/68‑1 TACACTTCGCCTTTTAAAACTAATTATCACGATAAACATAGCGGCGAAGTGTAGCCTTTTTCCCCGC < 1:2566520/67‑1 TACACTTCGCCTTTGAAAACTCATTATCACCAAAAACATCGCGGCGAAGTGTAGCCTTTTCCCCCGC < 1:30149264/67‑1 ACTTCGCCTTTGAAAACTCATTATCACGATAAACTTAGAGGCGAAGTGTAGCCTTTTTCACCGCCTAA > 1:23980155/1‑68 CCTTTGAAAACTCATTATCACGATAAACATAGAGG < 1:18244853/35‑1 AGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAA < 1:5976145/68‑1 GGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAA > 1:24812608/1‑68 GGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAA > 1:24433600/1‑68 GGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGGAAAAGTAAAAAA > 1:39076407/1‑68 GCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG > 1:20321719/1‑68 GCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG > 1:15789952/1‑68 CGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG < 1:35038789/67‑1 CGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG < 1:34833382/67‑1 CGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG < 1:6194557/67‑1 CGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAG < 1:15581154/67‑1 GAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTG < 1:606146/68‑1 GAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTG < 1:6277842/68‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTC < 1:5048058/68‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTC < 1:32858465/68‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTC < 1:29178349/68‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTC < 1:14303812/68‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:14563964/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:10743336/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:41776520/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:41237955/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:38980546/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:35036125/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:19544469/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:34025716/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:29835336/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:28253998/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:23306174/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:2360072/67‑1 AGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGT < 1:23708893/67‑1 TGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > 1:43591552/1‑68 TGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > 1:37410442/1‑68 TGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > 1:21122473/1‑68 TGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > 1:11073956/1‑68 TGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAA < 1:19350519/60‑1 GGCTGGGATTAGGCGGGGAAAAAGGCTACACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4620420‑4620345‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgaagtGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAAAAGTGTCCG > CP009273/4620392‑4620458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |