| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 248296 = | 193 (0.370) | 30 (0.070) | 10/96 | NT | 12.7% | coding (912/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | 248360 = | 248 (0.550) | coding (976/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 148 total aligned reads displayed.
CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/248369‑248296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT > CP009273/248360‑248424 CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGC < 1:17956714/68‑1CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGC < 1:17447710/68‑1CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGC < 1:39578766/68‑1CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:19618879/1‑67CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:33208505/1‑67CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:33467651/1‑67 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTTGATCAGCTTTATTCAGCC > 1:23673131/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCCGCTTTATTCAGCC > 1:29514707/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCTGCC > 1:483534/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:40466200/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:19007256/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:20326999/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:20358493/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:40039123/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:21621344/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:37805836/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:22812643/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:23861782/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:36360938/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:35487577/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:34263539/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:34109139/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:28672357/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:33541709/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:308812/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:31965320/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:5404480/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:14350703/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:15476119/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:13931820/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:15616726/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:7798374/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:13659501/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:13111161/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:11657988/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:43340071/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:1802354/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:42959474/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:18588287/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:9165346/1‑68 ACCGCGCCCGCCGCGGCGTTCACCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:11626391/1‑68 ACCGCGCACGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:14021312/1‑68 CCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:23379123/1‑67 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCGGCTTTATTCCGCCGC > 1:9590955/1‑68 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC > 1:39182804/1‑68 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACACGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC > 1:14795240/1‑68 GCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCG > 1:35614646/1‑68 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:7918148/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:37669039/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:8016038/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:5030827/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:39695276/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:4643333/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:10536293/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:42594043/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:31441263/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:3093371/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:22639286/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG > 1:28184906/1‑67 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:10802811/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGGGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:42643009/67‑1 CGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGG < 1:37265353/68‑1 CGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGG < 1:18120364/68‑1 CGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCG < 1:28724219/67‑1 CGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:2143546/61‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:2740806/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:37445061/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:6712664/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:30162894/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:21222875/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:38706591/68‑1 GGCGTTCATCCCAGGCTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCCGCCGCGGCGGGCGCGGT < 1:19393926/68‑1 CGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTG < 1:22139642/67‑1 GTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCCGCCGCGGCGGGCGCGGTGTG < 1:17095809/68‑1 tccTCCCCGGTTTTCCGCCCGGGGGCGATTAGATCCGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCG < 1:25287170/65‑1 TCATCCCCGGTTTTACGCGCGGTGGCGATTAGATCCGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCG < 1:6601545/68‑1 TCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCG < 1:16252758/68‑1 TCATCCCAGGTTTTACGCGCGGTGGCGATTACAGCAGCTTTATTCCGCCGCGGCGGGCGCGGTGTGCG < 1:13913318/68‑1 CCCAGGCTATACGCGCGGGGGCGATTAGAGCCGCTTTATTCCGCCGCGGCGGGCGCGGTGTGCGTCTG < 1:18729993/68‑1 CCAGGTTTTACGCGCGGGGGCGATTAGATCAGCTTTATGCCGCCGCGGCGGGCGCGGTGTGCGTCTGG < 1:33745366/68‑1 TTTCCGCGCGGTGGCGATTAGATCAGCTTTATTCCGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGG < 1:29292674/67‑1 TTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGG < 1:43561893/67‑1 cCGCGCGGGGGCGATTAGAGCCGCTTTATACCGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGC < 1:34494925/67‑1 ACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGC < 1:22855986/68‑1 ACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGC < 1:36502522/68‑1 GCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCAT < 1:41194953/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:15927473/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:40691223/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:43563659/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:16159954/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAG > 1:10473267/1‑67 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:17292668/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:17772709/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:2113975/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:14618875/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:24556879/68‑1 GCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAA < 1:25501229/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT < 1:38467233/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT < 1:31618059/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA > 1:8734788/1‑65 CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/248369‑248296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT > CP009273/248360‑248424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |