| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 442673 = | 442 (0.840) | 25 (0.060) | 13/90 | NT | 5.6% | coding (489/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | 442734 = | 491 (1.160) | coding (428/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 179 total aligned reads displayed.
TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:43393489/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:15508879/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:29332142/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:2986596/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:30084014/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:3562723/1‑68 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:10269208/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:24527705/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:28511630/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:3186696/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:34102150/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:40118215/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:10399717/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:9352438/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:41561072/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:42379525/1‑67 GTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC > 1:26178910/1‑68 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:23625982/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:7184439/67‑1 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:23191143/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:1217852/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:4278129/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC < 1:33403772/68‑1 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC < 1:36680828/68‑1 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:37750618/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCG < 1:18017395/67‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:33199467/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:41938075/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:37643033/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGAGCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:9005234/68‑1 GCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA > 1:19716386/1‑67 TCTCCGGCGCTGCGCCGCCGGTGATGGACTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:13622800/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:26152965/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:25185320/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:9925197/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:28508250/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:14568343/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:40040942/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:14784184/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:14856231/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:1577005/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:2758796/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:20162893/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGC < 1:11077791/67‑1 TCCGGCGCTGCGCCGCCGGTGATGGGCTACTGTGCGGAAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:22238253/67‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCC < 1:41798945/68‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCC < 1:13062345/68‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCC < 1:18429194/68‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGC < 1:13464258/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCA < 1:26039085/68‑1 GCCGGTGATCGGCAACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:43207506/68‑1 GGTGAGCGGCTACTGTGCGGTAACCGGTGCGTCCGATCGCGGCGCACCGCCGGAGAGCGAACCAATCA < 1:9619139/68‑1 TCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:13481191/41‑1 CGGCTCCTGCGCGGTACCCGGTGAGTCCGAACGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:42927833/68‑1 CGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:14013958/68‑1 CGGCTACTGTGCGGTAACCGGTGAGTCCGAACGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:27119028/68‑1 CGGCTACTGGGCGGTAACCGGTGAGTCCGATAGCGGCCCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:21186940/68‑1 CGGCGACTGTGCGGGAACCGGGGAGTTCGATCCCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:11232734/68‑1 GGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:41137023/67‑1 GGCTACTGTGCGGCAACCGGTGAGTCCGCTACCGGCCCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:39712145/67‑1 TACTGGGCGGGAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTA < 1:9033316/68‑1 ccgGTGCGGTAACCGGGGCGTTCCATCGCGGCGCAGCGCCGGAGTGCGAACCAATCAACGTGCCGTAG < 1:480165/65‑1 ACTGCGCGGAACCCGGCGAGCTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:8296856/68‑1 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTTCAGGCTA > 1:24296171/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCga > 1:28626431/1‑66 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:23544049/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:14658153/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTGTCATGTACAGGCTA > 1:29665799/1‑68 ctGCGCAGCGCCGGAGAGCGAACCAATCAACGTCCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:21011073/65‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT > 1:20568874/1‑68 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT > 1:18940396/1‑68 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATA > 1:3391463/1‑68 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATA > 1:14472740/1‑68 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATA > 1:26461825/1‑68 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:13770702/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:7901147/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:10084964/67‑1 tGCGCCGGATAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCTTTTCATGTACAGGCTATAAACG < 1:43075411/66‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:38635112/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:3404506/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:13191177/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:19537561/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG > 1:19287590/1‑67 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:4882398/67‑1 AGCGCCGGAGAGAGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:39505499/67‑1 GCCGTAGAGCGAACCAATCAACGTGCCTTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:3533799/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:20709970/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:25845697/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:17196213/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:12405745/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:16876848/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:31202353/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:43325772/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:32900375/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:153837/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:5676619/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:17036699/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:16349006/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:32344445/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:24862003/1‑67 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |