New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 548176 =546 (1.040)32 (0.070) 9/96 NT 6.0% coding (381/510 nt) purE N5‑carboxyaminoimidazole ribonucleotide mutase
?CP009273 548229 = 530 (1.170)coding (328/510 nt) purE N5‑carboxyaminoimidazole ribonucleotide mutase

Only 100 of 176 total aligned reads displayed.

AGCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/548250‑548176
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcaTTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCAC  >  CP009273/548229‑548295
                                                                                                                                              
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAGGCTGGC                                                                           >  1:25904860/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAGGCTGGC                                                                           >  1:41063749/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:10121783/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:26497195/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:40114892/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:21415602/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:6002959/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:3654345/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:18456149/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:1779534/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:8362687/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:14303924/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:32525408/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:10826257/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:11936075/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:12690013/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:31503412/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:13475198/1‑68
 GCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:33060828/1‑68
 GCCTCTACTCCATCGGACAAATGCCGCGCGGCATTGCCTTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:19100618/1‑68
  CCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGC                                                                           >  1:2391463/1‑67
  CCTCTACTCCATCGTACAAATGACGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGATGGC                                                                           >  1:28168074/1‑67
   CTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGC                                                                         >  1:13614367/1‑68
   CTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGC                                                                         >  1:7358977/1‑68
   CTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGC                                                                         >  1:38265771/1‑68
   CTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGC                                                                         >  1:16433684/1‑68
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTACCGCTGGCGCG                                                                        >  1:35331347/1‑68
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        <  1:28491548/68‑1
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        >  1:31266194/1‑68
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        >  1:24210355/1‑68
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        <  1:23561438/68‑1
    TCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        <  1:6206649/68‑1
     CTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGG                                                                       <  1:17143024/68‑1
     CTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCG                                                                        >  1:27558756/1‑67
      TACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGC                                                                      >  1:21667859/1‑68
      TACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGC                                                                      >  1:23963180/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:27680758/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:34845840/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:30213673/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     <  1:41792582/68‑1
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:1318449/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:9761675/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:14519665/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:15550258/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     <  1:18163744/68‑1
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:8155334/1‑68
       ACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     >  1:81498/1‑68
       ACTCCATCGTACAAATCCCGCGCGGCATTCCGGTGGCTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     <  1:36246464/68‑1
       ACTCCATCGTACAAAGGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA                                                                     <  1:34631524/68‑1
          CCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTT                                                                  <  1:31811269/68‑1
               GTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACG                                                             <  1:19955670/68‑1
               GTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACG                                                             <  1:4685252/68‑1
               GTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACG                                                             <  1:10420624/68‑1
                 ACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGAT                                                           <  1:28825606/68‑1
                 ACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGAT                                                           <  1:39607789/68‑1
                 ACAAATGCCGCGCGGCATTCCGGGGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGAT                                                           <  1:41408151/68‑1
                    acTGCCGCGCGCCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:3741441/66‑1
                    aagGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:10146408/65‑1
                    AATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:31074096/68‑1
                    AATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:29641605/68‑1
                    AATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:5409301/68‑1
                    AATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGA                                                        <  1:18519468/68‑1
                     ATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAG                                                       <  1:4525848/68‑1
                     ATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAG                                                       <  1:29256209/68‑1
                      tcCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGT                                                      <  1:5152132/66‑1
                      TGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGT                                                      <  1:14131048/68‑1
                            cCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGGC                                                <  1:28443188/67‑1
                            GCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGGC                                                <  1:42595536/68‑1
                            GCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGGC                                                <  1:39316917/68‑1
                            GCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGG                                                 <  1:27534096/67‑1
                            GCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGG                                                 <  1:895337/67‑1
                              GGCATTCCGGGGGGCACGCTGGCGATGGGTAAAGCTGGCGCGGCATTTGTACGATGGAGTAGAGGCTA                                              <  1:35940024/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:22139257/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:23396293/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:23199444/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:43018220/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:20259894/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:7717217/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:15113301/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:3262410/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:3135481/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:33652442/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:39268245/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:35868342/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGC         <  1:36891375/68‑1
                                                                   GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGGGCGGCGCTCTGTACTGGCACGC         <  1:6113592/68‑1
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCC       <  1:21380689/68‑1
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCC       <  1:16924301/68‑1
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCC       >  1:29473538/1‑68
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCC       >  1:36468225/1‑68
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCC       >  1:41216164/1‑68
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCC        <  1:626092/67‑1
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCC        <  1:26313776/67‑1
                                                                     GCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCC        <  1:38920194/67‑1
                                                                       GGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCCGCGCTCTGTACTGTCCCGCCCA      >  1:37048549/1‑67
                                                                        GCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGC    >  1:25630864/1‑68
                                                                         CATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGC    <  1:21971787/67‑1
                                                                         CATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGC    <  1:25083074/67‑1
                                                                          ATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCA   <  1:31649741/67‑1
                                                                          ATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCA   <  1:17121704/67‑1
                                                                                                                                              
AGCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/548250‑548176
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcaTTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCAC  >  CP009273/548229‑548295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.