BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 725724	NA (NA)	26 (0.060)	14/94	NT	NA	coding (686/4194 nt)	rhsC	Rhs family putative polymorphic toxin
*	?	CP009273	= 725738	NA (NA)	26 (0.060)	14/94	NT	NA	coding (700/4194 nt)	rhsC	Rhs family putative polymorphic toxin

Only 100 of 383 total aligned reads displayed.

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/725649‑725724

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtgaTTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCA  <  CP009273/725738‑725673

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                            <  1:21082714/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                            <  1:22596555/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                            <  1:37158870/68‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCC                                                                            <  1:6456557/68‑1

 GCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCG                                                                           <  1:36158611/68‑1

  CCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCG                                                                           >  1:17078663/1‑67

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                         <  1:9204969/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                         <  1:8868302/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                         <  1:10067935/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                         <  1:26277084/68‑1

   CGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCC                                                                         <  1:13731998/68‑1

     TACCGGGTACTGACCGGGCTGGTGGCCCGCTTCGGGCGCACACAGACGTTCCCCCGCGAAGCCGCCGG                                                                       >  1:30701318/1‑68

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       >  1:25409752/1‑68

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       >  1:33940509/1‑68

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       >  1:27848456/1‑68

     TACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       >  1:12445126/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGg                                                                      >  1:15210697/1‑67

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                      >  1:13809196/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                      >  1:26601546/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGT                                                                      >  1:33395518/1‑68

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:2368329/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:34501860/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:24315770/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:35463037/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:10135682/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:33175497/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:31246341/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:8095693/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:42685584/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:8710365/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:16511268/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:43587221/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:17395002/67‑1

      ACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGG                                                                       <  1:18183898/67‑1

       CCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTG                                                                     <  1:31735594/68‑1

       CCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTG                                                                     >  1:591463/1‑68

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                    <  1:7766549/68‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                    <  1:6335885/68‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                    >  1:12009866/1‑68

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA                                                                    <  1:2571832/68‑1

        CGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGCTGA                                                                    <  1:8369519/68‑1

                       CTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGATTTCGCCGCTGAAT                                                      <  1:23048012/67‑1

                        TGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGATTTCGCCGCTGAATTC                                                    <  1:39313739/68‑1

                               CCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGC                                              <  1:2032116/67‑1

                                      GGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGATTGCGCCGCTGAATTCACCGGCGGCTTCGC                                      <  1:7007526/68‑1

                                                tGACGTTCCCCCGCGAAGCCGCCGGTGATTGCGCCGCTGAATTCCCCGGCGGCTTCGCGGTGGAACGT                            <  1:29495917/67‑1

                                                    GTTCCACCGCGCAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGT                        >  1:8522347/1‑68

                                                        CACCGCGAAGCCGCCGGTGATTTCGCCGCGGAATTCACCGGCGGCTTCGCGGTGGACCGTCTGTGTGC                    >  1:22330633/1‑68

                                                            GCGAAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCC                >  1:41866538/1‑68

                                                            GCGAAGCCGCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCC                >  1:15909955/1‑68

                                                                   CGCCGGTGATTTCGCCGCTGAATTCGCCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:18542034/1‑68

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:5309198/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:32856306/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:38958925/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:40224444/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:28775712/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:3153711/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:13157319/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:15674241/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:19232870/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:21867122/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        <  1:2407086/68‑1

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:40037553/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:14645958/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:16717367/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:17657761/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:1895947/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:43233655/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:19566348/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:397324/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:33075037/1‑67

                                                                    GCCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGAGGAACGTCTGTGTGCGCCCGAAGCGG         >  1:12775822/1‑67

                                                                     CCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        >  1:27544630/1‑67

                                                                     CCGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGT        >  1:35061367/1‑67

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:41173263/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:29801613/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:28501166/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:27635120/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:27019170/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:32634760/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:41608852/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:40872620/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:40313960/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:39570178/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:2586290/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:23463689/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:36781870/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTC       <  1:11415144/67‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTC       <  1:35686152/67‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTC       <  1:10325648/67‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTC       <  1:38708826/67‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGGCTGTGTGCGCCCGAAGCGGTCC      <  1:11031056/68‑1

                                                                      CGGTGATTTCGCCGCTGAATTCACCGGCGGCTGCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      <  1:20670445/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCA     <  1:2742336/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCA     <  1:1333145/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCA     <  1:21389955/68‑1

                                                                       GGTGATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCC      >  1:38205171/1‑67

                                                                          GATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCA  >  1:947334/1‑68

                                                                          GATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCA  >  1:30277285/1‑68

                                                                          GATTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACC   <  1:14228818/67‑1

CGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/725649‑725724

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggtgaTTTCGCCGCTGAATTCACCGGCGGCTTCGCGGTGGAACGTCTGTGTGCGCCCGAAGCGGTCCACCA  <  CP009273/725738‑725673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.