| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 859744 = | NA (NA) | 10 (0.020) | 5/92 | NT | NA | coding (647/663 nt) | fsaA | fructose‑6‑phosphate aldolase 1 |
| ? | CP009273 | 859774 = | NA (NA) | intergenic (+14/+62) | fsaA/moeB | fructose‑6‑phosphate aldolase 1/molybdopterin synthase sulfurylase | |||||
Only 100 of 180 total aligned reads displayed.
CCTGATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/859821‑859744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgttctgcATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATTAC > CP009273/859774‑859839 CCTGATAAGACGCGGCACTCCGCCACGTCATCAGC‑ATTTATGAGGATGCAGAACGTCCGGTTAAATCG > 1:21962837/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:5221236/68‑1 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:19744963/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:24134870/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:18876072/68‑1 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:27057688/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:39728455/68‑1 AAGACGCGGCACTCCGCCACGTCATCCGCAATTTATGAGGATGCAGAACGTCCGGTTAATTCGCCGTT > 1:6185834/1‑68 AAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:13485202/1‑67 AGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGa > 1:27815337/1‑65 AGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTC < 1:20530047/68‑1 AGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:7334928/1‑66 AGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:4582232/1‑66 GACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:43446951/1‑65 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:29678409/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:22236059/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:10935347/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:24665284/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:30808967/1‑67 CGCGGCTCTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:12601030/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCCGAACGTCCGGTTAAATCGACGTTCTG > 1:37569902/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTTAATCGACGTTCT < 1:25586879/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:3282826/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:37365339/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:4219481/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:10013831/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:32302494/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:43493591/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:35498387/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:12726020/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:3712705/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:12737275/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:8023467/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:39167953/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:6784745/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:40376652/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG < 1:16771934/67‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:27114161/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:18250652/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG < 1:6154155/67‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:21764281/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:20802832/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:19375382/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:194270/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:25090426/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:9433397/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:36143004/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:4065572/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGATAAATCGACGTTCTG > 1:15206993/1‑67 ACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCT < 1:24350228/67‑1 GCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGAC > 1:23914224/1‑50 CACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATT < 1:40431127/68‑1 CGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGC < 1:39000849/68‑1 CGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGC < 1:27186270/68‑1 ggCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCT < 1:33423548/66‑1 TCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCTGATG < 1:24846453/68‑1 AATTTATGCGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCTGATGACGT < 1:8887876/67‑1 TTTTTGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCTGATGACGTGGC < 1:12392239/68‑1 ACGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTG > 1:28225528/1‑67 ctTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:29850669/65‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:42405854/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:2306995/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:35683215/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:31392138/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:31956561/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:28576416/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:40233699/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:2240041/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:28674481/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:29137158/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:19856951/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:18564613/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:30404237/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:15602796/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:36195219/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:7220690/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:35242060/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:34499572/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:8205993/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:13328911/67‑1 CGTTCTGCATCCTCATAAATTGCTGACGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:21236064/67‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:14483697/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:31485871/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:23426094/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:40940180/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:34056593/68‑1 TCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAAT < 1:35619576/68‑1 TCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAAT < 1:31399179/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:2376970/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:24771353/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:17494105/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:6406917/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:33871265/68‑1 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:303692/1‑67 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:30667697/1‑67 GCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATTAC < 1:38383808/68‑1 GCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:28604608/1‑66 GCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:13801732/1‑66 CATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:40161288/1‑65 CATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:10579099/1‑65 CCTGATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/859821‑859744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgttctgcATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATTAC > CP009273/859774‑859839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |