| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2436008 | 402 (0.760) | 25 (0.060) | 8/94 | NT | 7.3% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | = 2436093 | 296 (0.670) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < CP009273/2436093‑2436028 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:41454064/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:35177307/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:26173211/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:26516344/1‑67 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:7953097/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:6069704/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:4923137/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:29875035/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:29751654/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15119519/1‑68 GCTTTGGGCGGAAACGGGTAATGGTTTTCGGGGGGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:26125758/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:18887118/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:27488701/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:19873932/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:21251923/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:23297446/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:27315913/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:375463/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:548100/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:8641005/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:9345806/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:9557007/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:14651237/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:14608016/67‑1 CTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCCCCGCG > 1:22103774/1‑67 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:18432193/68‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:34803287/68‑1 AGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGCCCACCACGCGCTGGCAATCCCACg > 1:6213975/1‑67 AGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGGCAACAACGCGCTGGCTTTACCCCC > 1:7393503/1‑68 AGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACCACGCGCTGGCGATACCACC > 1:39916406/1‑68 AGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAGTACCACC > 1:238407/1‑68 AGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACGACC > 1:26651139/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACACCGCGCTGGCAATACCCCCGCC > 1:9532756/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACCACGCGCTGGGAATCCCGCCGCC > 1:1104759/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCC > 1:25651072/1‑68 TTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCC > 1:40925941/1‑66 ACCGCTCCCCTGCTCCGCGCCGTTATAGCGCCAGCGACAACAACGCGCTGGCTATACCCCCGGCGATA > 1:18896456/1‑68 ACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGAGAACATCGCGCTGGCAGTACCACCGCCGcgt > 1:23574113/1‑65 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCGGCAACGCGCTGGCAATACCACCGCCGATAA > 1:14478670/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCATGACCACGGCCGATAA > 1:37222835/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTGGCAATACCCCCGCCGATAA > 1:16742508/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCTCTACCACCGCCGATAA > 1:10682745/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCACTACCACCGCCGATAg > 1:874877/1‑67 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAA > 1:42185079/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTGGCAATACCACCGCCGAGAATC > 1:40823048/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCCCCGCCGATAATC > 1:18272102/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATC > 1:19905662/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATC > 1:25823199/1‑68 TCCCCTGCTCCGCGCCGTAATAGCGCCCGCGACACCACCGCGCTGGCAATACCCCCGCCGATACTCG > 1:38417407/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACCACGCGCTGGCAATACCCCCGCCGATAATCG > 1:33565562/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACCACGCGCTGGCAATTCCCCCGCCGCTATTCG > 1:9441082/1‑67 CCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGC > 1:34979810/1‑68 GCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCCCCGCCGATAATCGCCGCTT > 1:7147644/1‑67 GCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTT > 1:1880952/1‑67 TCCGCGCCGTAATAGCGCCCGCGCCAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:27794955/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACACCGCGCTGGCAATACCCCCGCCGATAATCGCCGCTTCCC > 1:34156764/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:29767249/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:24982109/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:32627297/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:3957803/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:27474041/1‑68 CCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG > 1:27068387/1‑68 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:26754338/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:9376570/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:17162400/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:13690399/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:23227373/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:43180353/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:4127175/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:27772257/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:24512964/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGATGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:1030452/68‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:10167121/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:12183471/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT < 1:8892957/67‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:39639606/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:41119496/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:25110105/1‑67 CCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:21498266/1‑66 CGTAATCGCGCCAGAGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:10157954/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGGAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:18561664/1‑65 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:12003484/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:11343743/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:27658054/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:10388672/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:4731471/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:35881170/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:33575419/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:2900760/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:27594172/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:26887721/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:16023711/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:18196132/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:37831991/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:13187830/1‑65 GTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < 1:32596513/68‑1 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTG < CP009273/2436093‑2436028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |