| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2845465 = | 287 (0.550) | 30 (0.070) | 11/96 | NT | 8.5% | coding (243/273 nt) | hypC | hydrogenase maturation protein |
| ? | CP009273 | 2845525 = | 399 (0.880) | coding (31/1122 nt) | hypD | hydrogenase maturation protein | |||||
Only 100 of 115 total aligned reads displayed.
TGCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845538‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845525‑2845590 TGCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC < 1:19543170/68‑1 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCG < 1:9268769/68‑1 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:9573055/1‑67 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:9524617/1‑67 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:43205192/1‑67 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:30531864/1‑67 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:22112767/1‑67 GCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC > 1:21467941/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTTTTTTTCCTCGCCATACAACAGCGC > 1:26647979/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:2796234/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:6746222/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:40602538/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:3851944/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:38011924/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:23079228/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:21473706/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:14778002/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:12292134/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG < 1:15153377/68‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:29454751/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:4357945/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC < 1:3111994/67‑1 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:386637/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC > 1:32260863/1‑67 ATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTATCCTCGCCATACAACAGCGC > 1:41984448/1‑67 TCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC < 1:28977063/68‑1 caaCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:21854840/65‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:38219191/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:2296452/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:22667905/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:14927773/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:36749571/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:37592484/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:24252392/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:43439066/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:491084/68‑1 CACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC < 1:8565250/68‑1 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:26979132/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:16749445/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:1454787/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:12870106/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:40040177/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:9549055/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:21275805/1‑68 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC > 1:10927271/1‑67 ACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC > 1:21955597/1‑67 CCTGTTCCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG < 1:39378255/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACTCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:16890611/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:11287247/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:21787637/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:36164682/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG < 1:43659741/68‑1 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG > 1:10649068/1‑67 CCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTACCTAGCCATACAACAGCGCGCCG > 1:43491102/1‑67 CTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:18513040/68‑1 CTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:40030198/68‑1 CTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA < 1:22797404/68‑1 CTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATGATTTTTCCTCGCCATACAACAGCGCGCCGcc > 1:19038230/1‑66 T‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:19327557/68‑1 T‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:35027130/68‑1 T‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:19894225/68‑1 T‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG < 1:13396589/68‑1 CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGT < 1:43485017/68‑1 CGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCG > 1:34586815/1‑52 GCGCGATATTCATCAACAACACGCATTATTTTTCCTCGCCATCCAACCGCGCGCCGGAACAGGTGAT < 1:19168808/67‑1 GCGATATTCATCACCAAAAGGCATTAATTTTCCTCGCCATACCACAGCGCGCCGGAACAGGTGATGC < 1:30535216/67‑1 GCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGC < 1:5527207/67‑1 GCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGC < 1:27498687/67‑1 GCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGC < 1:7215750/67‑1 GATATTCATCAACAACACCCATTTTTATTCCACGCCATCCAACAGCGCGCCGGAACAGGTGATGCAG < 1:23392501/67‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGT < 1:5596036/68‑1 GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG < 1:8328110/67‑1 aATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:27279580/66‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACCGCGCGCCGGAACAGGTGATGCAGTT < 1:43280703/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:4235565/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:14764812/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:39048705/67‑1 TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:30142929/67‑1 TATTCATCAACAAAACGCATTATTATTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT < 1:19002662/67‑1 ATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAA < 1:350634/68‑1 TCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATT < 1:37354620/68‑1 TCATCAACAAAACGCATAATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATT < 1:29273062/68‑1 CAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGC < 1:15676873/68‑1 CAACAAAACGCATTATTTTTCCTCGCCAAACACCAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGC < 1:12271091/68‑1 ATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCT < 1:25697581/68‑1 ATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCT < 1:12722540/68‑1 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC < 1:16207280/68‑1 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:3266387/1‑68 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC > 1:23105761/1‑68 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGCACCTGCTGCACATCTCTCTTGCCCCG > 1:5766190/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC < 1:4220620/68‑1 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:17215624/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:6775284/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:25685043/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:27743173/1‑67 GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG > 1:38044911/1‑67 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGCACGTGCTTCACATCTCTCTTACACCGCC > 1:16032191/1‑67 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG < 1:26736529/68‑1 GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG < 1:2635158/68‑1 CGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA < 1:11165685/68‑1 TGCATCACCTGTT‑CCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2845538‑2845465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845525‑2845590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |