| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 300 (0.570) | 32 (0.070) | 8/96 | NT | 10.6% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 283 (0.630) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 114 total aligned reads displayed.
CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215274‑3215339 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:33814883/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:35035273/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:30618436/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:4754887/68‑1CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:29290527/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:39709314/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:19322645/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:40979527/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAACCAGATATTGTCGGTCAACGCGCTGGC > 1:42562492/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:29608801/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:36568491/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:40271916/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:27110646/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:20376458/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:43113814/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:31580960/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:86411/1‑68 CGCATCGTAACAGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAG < 1:2211375/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:3786985/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:34722550/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:43304396/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:10510942/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:10435340/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:2910056/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:38193674/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:42864987/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:42969825/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:27388665/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:5994545/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:25837076/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:18699600/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:17620926/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:1729146/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:15154862/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:14019237/67‑1 ATCGTAACCGCTGCCGGGGTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:19875019/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:15708641/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:4363921/68‑1 AACCGCGGCCGGGTTGGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTAC < 1:27073115/67‑1 cCTGCCGGGTTCGTGAAAGTCGATAAAACAGATAATGTCGGGCAACGCGCTGGCAGCGGTTACGATGC < 1:39015604/67‑1 GCTGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGC < 1:20960176/68‑1 cGCCGGGTTCGTGAAAGTCGATAAAACAGATATAGGCGGGCACCCCGCGGGCAGCGGTTACGATGCGG < 1:12088735/67‑1 TGCCGGGTTCGTGAAAGTCGATAAACCAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:18042014/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:8526181/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:23306599/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGG < 1:20315550/68‑1 TGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGGCGGTCAACGCGCTGGCAGCGGTTACGATGCG < 1:8517883/67‑1 TGCCGGGTGCGTGAAAGTCGATAAAACAGATATTGTCGGTCCACGCGCTGGCAGCGGTTACGATGCGG < 1:14430945/68‑1 TGCCGGGTGCGTGAAAGGCGATAAAACAGATATTGGCGGTCAACGCGCTGGCAGCGGTTACGAAGCGG < 1:11811335/68‑1 TGCCGGGCTCGTGAAAGTCGATAAACCAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:31679508/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:5265627/68‑1 GCCGGGTTCGAGAAAGGCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:32061912/68‑1 CGGGTTCGTGAAAGTCGCTAATACAGATATTGTCGGGCATCGCGCTGGCAGCGGTTACGATGCGGTGG < 1:21026299/68‑1 CGGGTTCGTGAAAGTCGATAAACCAGATATCGTCGGTCAACGCGCTGGCACCGGTTACGATGCGGTGG < 1:38009326/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGCCACCGCGCTGGCAGCGGTTACGATGCGGTGG < 1:34772201/68‑1 CGGGTTCGTGAAAGGCGATAAAACCGATATTGGCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:23736212/68‑1 CGGGTTCGGGAACGTCGATAAAACAGATATTGGCGGTCAACGCGCGGGCAGCGGTTACGATGCGGTGG < 1:10404527/68‑1 CGGGTTCGGGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:8781303/68‑1 CGGGTGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACCCGCGGGCAGCGGTTACGATGCGGTGG < 1:13321150/68‑1 CGGGTGCGTGAAAGGCGATAAAACAGATATTGTCGGTCCACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:8886482/68‑1 GGGTTCGTGAAAGTCGATAAACCAGATATTGTCGGGCAACGCGCAGGCAGCGGTTACGATGCGGTGGA < 1:4629002/68‑1 GGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGA < 1:1557882/68‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:31401664/67‑1 GTTCGTGAAAGTCGATAAAACAGATATTGGCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:15861650/67‑1 GTTCGTCAACGTCGATAAAACAGATCTTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:19404978/67‑1 GTTCGCGAAAGTCGATAACACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:2301620/67‑1 GTGAAAGTCGAAAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATCGA < 1:30770414/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTTAAGAAATCATCGACTTCTATAT < 1:1701419/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:1237646/68‑1 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:19231659/1‑68 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:37667248/1‑68 CAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:30583474/1‑68 atCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:36347763/65‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:6568019/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:6159081/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:20117940/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:20662447/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:21039945/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:23643196/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:18049459/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:24719668/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:19968442/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:27261149/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:42040990/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:1971034/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:3385558/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTA > 1:35164376/1‑43 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTTTATCAc > 1:5450096/1‑66 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:27275495/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:5397090/1‑67 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > 1:17016475/1‑68 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC < 1:3488405/67‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:3217418/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:27063845/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:21026465/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:21796603/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:30164693/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:11249385/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:29256738/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:13557091/65‑1 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215274‑3215339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |