New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	725814 =	NA (NA)	8 (0.020)	4/96	NT	NA	coding (776/4194 nt)	rhsC	Rhs family putative polymorphic toxin
	?	CP009273	725875 =	NA (NA)					coding (837/4194 nt)	rhsC	Rhs family putative polymorphic toxin

GTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA  >  CP009273/725747‑725823                                                                    |          gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:12023269/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:38317908/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:36505138/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:68681/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:3624833/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:39855389/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:10451852/68‑1 (MQ=35) gTGACGGACGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:43425576/68‑1 (MQ=25)   gACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGcc          <  1:40999812/67‑1 (MQ=35)   gACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGcc          <  1:26975330/67‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCgg       <  1:42587109/68‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCgg       <  1:38852676/68‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCgg       <  1:31496023/68‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCgg       <  1:2128572/68‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCg        <  1:3412092/67‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCg        <  1:14763070/67‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:23903411/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:20270959/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:29892935/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:30626165/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:19590392/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:6046052/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:16412657/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:606672/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:7103400/1‑68 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:3303359/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:41678539/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:38923087/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:7796123/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:26107734/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:15478358/1‑67 (MQ=35)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagc   >  1:26843765/1‑68 (MQ=35)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagc   >  1:10799133/1‑68 (MQ=35)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcacc   <  1:34527258/68‑3 (MQ=25)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcacc   <  1:7541617/68‑3 (MQ=25)          ggTGCCGGGCGTCACTTCCGGCTGGTCCTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagcc  >  1:29332913/1‑67 (MQ=255)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:3350685/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:23979454/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:18252108/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:15184065/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:13413297/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:7475766/1‑68 (MQ=35)                                                                    |          GTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA  >  CP009273/725747‑725823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.